RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CCDC157Q569K6 752 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 ACBD5Q5T8D3 534 aaPredicted RBP18.1■□□□□ 0.49
NME3-205ENST00000563854 RWDD4Q6NW29 188 aaKnown RBP18.1■□□□□ 0.49
NME3-205ENST00000563854 SELENOOQ9BVL4 669 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 ATP13A1Q9HD20 1204 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 ADAM22Q9P0K1 906 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 PPM1HQ9ULR3 514 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 PCDHGB2Q9Y5G2 931 aa18.1■□□□□ 0.49
NME3-205ENST00000563854 PCNX2A6NKB5 2137 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 PLRG1O43660 514 aaKnown RBP18.09■□□□□ 0.49
NME3-205ENST00000563854 RECQLP46063 649 aaPredicted RBP18.09■□□□□ 0.49
NME3-205ENST00000563854 CLEC16AQ2KHT3 1053 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 SLC45A4Q5BKX6 768 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 AGBL4Q5VU57 503 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 C22orf39Q6P5X5 142 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 ARCQ7LC44 396 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 BNIPLQ7Z465 357 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 PRPF39Q86UA1 669 aaKnown RBP18.09■□□□□ 0.49
NME3-205ENST00000563854 CHST14Q8NCH0 376 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 GRIN3AQ8TCU5 1115 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 GATA6Q92908 595 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 DYRK4Q9NR20 520 aa18.09■□□□□ 0.49
NME3-205ENST00000563854 TP53BP1Q12888 1972 aaPredicted RBP18.09■□□□□ 0.49
NME3-205ENST00000563854 ILVBLA1L0T0 632 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 C2CD4BA6NLJ0 364 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 SLC7A4O43246 635 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 CTSLP07711 333 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 KRT3P12035 628 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 UNGP13051 313 aaPredicted RBP18.08■□□□□ 0.48
NME3-205ENST00000563854 ATP1A3P13637 1013 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 CHRNA3P32297 505 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 DNA2P51530 1060 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 GNA12Q03113 381 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 NCAPHQ15003 741 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 ANO6Q4KMQ2 910 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 NAPEPLDQ6IQ20 393 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 RAB44Q7Z6P3 723 aaPredicted RBP18.08■□□□□ 0.48
NME3-205ENST00000563854 SLCO6A1Q86UG4 719 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 GATAD2AQ86YP4 633 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 OR2A12Q8NGT7 310 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 FAM172AQ8WUF8 416 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 CDC6Q99741 560 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 MYOCQ99972 504 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 TMEM121BQ9BXQ6 578 aaPredicted RBP18.08■□□□□ 0.48
NME3-205ENST00000563854 GDF3Q9NR23 364 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 OR12D3Q9UGF7 316 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 ZMIZ1Q9ULJ6 1067 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 MSRB2Q9Y3D2 182 aa18.08■□□□□ 0.48
NME3-205ENST00000563854 USP24Q9UPU5 2620 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 CALB1P05937 261 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 ATXN1LP0C7T5 689 aaKnown RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 GPD1P21695 349 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 RFC1P35251 1148 aaPredicted RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 ADRA1BP35368 520 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 GRK6P43250 576 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 CLCN6P51797 869 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 PTP4A2Q12974 167 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 INAVAQ3KP66 663 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 RETSATQ6NUM9 610 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 DNAJC24Q6P3W2 148 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 CCDC185Q8N715 623 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 BAHD1Q8TBE0 780 aaPredicted RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 ADAMTS14Q8WXS8 1223 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 ZCCHC14Q8WYQ9 949 aaKnown RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 KLK6Q92876 244 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 ARRDC3Q96B67 414 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 ERGIC2Q96RQ1 377 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 ELF4Q99607 663 aaPredicted RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 AGPAT1Q99943 283 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 NAT10Q9H0A0 1025 aaKnown RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 HSD3B7Q9H2F3 369 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 KDM4CQ9H3R0 1056 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 TMEM63CQ9P1W3 806 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 IL36AQ9UHA7 158 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 DNAI1Q9UI46 699 aa18.07■□□□□ 0.48
NME3-205ENST00000563854 TPX2Q9ULW0 747 aaKnown RBP18.07■□□□□ 0.48
NME3-205ENST00000563854 A0A1B0GTQ1 180 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 A0A1W2PR77 199 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 LATO43561 262 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 DFNA5O60443 496 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 RNGTTO60942 597 aaKnown RBP18.06■□□□□ 0.48
NME3-205ENST00000563854 PRNPP04156 253 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 PTPN9P43378 593 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 SERPINH1P50454 418 aaKnown RBP18.06■□□□□ 0.48
NME3-205ENST00000563854 HDAC4P56524 1084 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 ARSIQ5FYB1 569 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 ARTNQ5T4W7 220 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 PIP5KL1Q5T9C9 394 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 SCYL2Q6P3W7 929 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 ZNF783Q6ZMS7 281 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 DPY19L3Q6ZPD9 716 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 STRADAQ7RTN6 431 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 GLRX5Q86SX6 157 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 ZNF354CQ86Y25 554 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 PHF13Q86YI8 300 aaPredicted RBP18.06■□□□□ 0.48
NME3-205ENST00000563854 FAM131CQ96AQ9 280 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 TBC1D31Q96DN5 1066 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 MAGEB5Q9BZ81 275 aa18.06■□□□□ 0.48
NME3-205ENST00000563854 PPARGC1AQ9UBK2 798 aaKnown RBP18.06■□□□□ 0.48
NME3-205ENST00000563854 ZNF212Q9UDV6 495 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms