RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 SLC45A4Q5BKX6 768 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 DNAJC24Q6P3W2 148 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 WDR59Q6PJI9 974 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 PRPF39Q86UA1 669 aaKnown RBP17.24■□□□□ 0.35
CLK3-210ENST00000563112 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 OR7D4Q8NG98 312 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 CENPIQ92674 756 aaPredicted RBP17.24■□□□□ 0.35
CLK3-210ENST00000563112 AASDHPPTQ9NRN7 309 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 SARDHQ9UL12 918 aa17.24■□□□□ 0.35
CLK3-210ENST00000563112 MAP1BP46821 2468 aaKnown RBP17.24■□□□□ 0.35
CLK3-210ENST00000563112 VILLO15195 856 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 DFNA5O60443 496 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 TRIM16O95361 564 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 PRNPP04156 253 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 RRM1P23921 792 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 CHRNA3P32297 505 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 NUDT1P36639 197 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 CNTN1Q12860 1018 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 ZNF423Q2M1K9 1284 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 RAB6CQ53S08 254 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 ACAD10Q6JQN1 1059 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 DCUN1D2Q6PH85 259 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 LINGO4Q6UY18 593 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 MON1BQ7L1V2 547 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 TMIEQ8NEW7 156 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 SLC6A18Q96N87 628 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 CAMK1GQ96NX5 476 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 ORAI3Q9BRQ5 295 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 RAB6CQ9H0N0 254 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 DYRK4Q9NR20 520 aa17.23■□□□□ 0.35
CLK3-210ENST00000563112 FNDC3AQ9Y2H6 1198 aaKnown RBP17.23■□□□□ 0.35
CLK3-210ENST00000563112 K7ERQ8 282 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 PLK4O00444 970 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 KPNA3O00505 521 aaPredicted RBP17.22■□□□□ 0.35
CLK3-210ENST00000563112 FLRT2O43155 660 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 SMAD6O43541 496 aaKnown RBP17.22■□□□□ 0.35
CLK3-210ENST00000563112 PLRG1O43660 514 aaKnown RBP17.22■□□□□ 0.35
CLK3-210ENST00000563112 RTN2O75298 545 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 PLEKP08567 350 aaPredicted RBP17.22■□□□□ 0.35
CLK3-210ENST00000563112 RHOQP17081 205 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 CD38P28907 300 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 MAPKAPK2P49137 400 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
CLK3-210ENST00000563112 HDAC4P56524 1084 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 TPM4P67936 248 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 POM121L1PQ3SYA9 428 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 SCYL2Q6P3W7 929 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 C22orf39Q6P5X5 142 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 IRF2BP2Q7Z5L9 587 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 SLFN11Q7Z7L1 901 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 OR2A12Q8NGT7 310 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 RHBDD1Q8TEB9 315 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 NTAN1Q96AB6 310 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 FAM131CQ96AQ9 280 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 TBC1D31Q96DN5 1066 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 SERAC1Q96JX3 654 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 CEP44Q9C0F1 390 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 ZNF212Q9UDV6 495 aa17.22■□□□□ 0.35
CLK3-210ENST00000563112 A0A1W2PQC6 194 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 SERPINC1P01008 464 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 GLDCP23378 1020 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 CTSKP43235 329 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 SERPINH1P50454 418 aaKnown RBP17.21■□□□□ 0.35
CLK3-210ENST00000563112 CCT8P50990 548 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 DNA2P51530 1060 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 METAP1P53582 386 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.35
CLK3-210ENST00000563112 FAM193AP78312 1265 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 ASIC2Q16515 512 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 EFHC2Q5JST6 749 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 MANEALQ5VSG8 457 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 LAYNQ6UX15 382 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 MCOLN2Q8IZK6 566 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 CCDC185Q8N715 623 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 BAP1Q92560 729 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 PPP1R16AQ96I34 528 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 VCPIP1Q96JH7 1222 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 MCEEQ96PE7 176 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 MAGEH1Q9H213 219 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 EBF2Q9HAK2 575 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 TMEM248Q9NWD8 314 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 IL36AQ9UHA7 158 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 DNAI1Q9UI46 699 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 PCOLCE2Q9UKZ9 415 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 HPCAL4Q9UM19 191 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 CACNA1BQ00975 2339 aa17.21■□□□□ 0.35
CLK3-210ENST00000563112 CXorf51AA0A1B0GTR3 108 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 LRRC53A6NM62 1247 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 FAM72CH0Y354 149 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 H0Y8X5 98 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 KCNK3O14649 394 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 CCP110O43303 1012 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 LATO43561 262 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 ZMPSTE24O75844 475 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 LRIG2O94898 1065 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 AIF1P55008 147 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 PPP2CBP62714 309 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 PPP2CAP67775 309 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 SCAPQ12770 1279 aa17.2■□□□□ 0.34
CLK3-210ENST00000563112 ST3GAL2Q16842 350 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms