RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MSRB2Q9Y3D2 182 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 DMXL2Q8TDJ6 3036 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 TARSL2A2RTX5 802 aaKnown RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 EIF3CLB5ME19 914 aaKnown RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 CD59P13987 128 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 MAPKAPK2P49137 400 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 ZNF75DP51815 510 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 GALCP54803 685 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 RWDD4Q6NW29 188 aaKnown RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 KIAA1324Q6UXG2 1013 aaKnown RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 SLC36A4Q6YBV0 504 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 NLRP14Q86W24 1093 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 DCAF4L2Q8NA75 395 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 CEP76Q8TAP6 659 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 SIPA1Q96FS4 1042 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 RPL10LQ96L21 214 aaKnown RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 HSPA12BQ96MM6 686 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 EIF3CQ99613 913 aaKnown RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 C2orf49Q9BVC5 232 aaPredicted RBP16.97■□□□□ 0.31
CDT1-202ENST00000562747 MAGEB5Q9BZ81 275 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 TMEM248Q9NWD8 314 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 NEU3Q9UQ49 428 aa16.97■□□□□ 0.31
CDT1-202ENST00000562747 ITPR1Q14643 2758 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 DSPP15924 2871 aaKnown RBP16.96■□□□□ 0.31
CDT1-202ENST00000562747 EDDM13A0A1B0GTR0 161 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 ARHGAP33O14559 1287 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 AKR1B10O60218 316 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 PRPSAP2O60256 369 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 OPHN1O60890 802 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 HTR7P34969 479 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 ATXN3P54252 364 aaPredicted RBP16.96■□□□□ 0.31
CDT1-202ENST00000562747 PIGHQ14442 188 aaPredicted RBP16.96■□□□□ 0.31
CDT1-202ENST00000562747 ERMARDQ5T6L9 678 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 PSTKQ8IV42 348 aaKnown RBP16.96■□□□□ 0.31
CDT1-202ENST00000562747 PYROXD2Q8N2H3 581 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 HDDC3Q8N4P3 179 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 CHCHD4Q8N4Q1 142 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 ARFGAP1Q8N6T3 406 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 CCDC42Q96M95 316 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 CAMK1GQ96NX5 476 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 PSMB7Q99436 277 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 CHP1Q99653 195 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 EPAS1Q99814 870 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 NUP85Q9BW27 656 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 NHEJ1Q9H9Q4 299 aaPredicted RBP16.96■□□□□ 0.31
CDT1-202ENST00000562747 ITM2CQ9NQX7 267 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 USP36Q9P275 1121 aaKnown RBP16.96■□□□□ 0.31
CDT1-202ENST00000562747 IP6K2Q9UHH9 426 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 SLCO3A1Q9UIG8 710 aa16.96■□□□□ 0.31
CDT1-202ENST00000562747 A0A0D9SEW6 157 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 TTC34A8MYJ7 566 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 TAF4O00268 1085 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 ATP9BO43861 1147 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 SIN3BO75182 1162 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 LRCH4O75427 683 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 GJB3O75712 270 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 H2AFZP0C0S5 128 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 ACADMP11310 421 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 EPHB2P29323 1055 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 MIPP30301 263 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 PCK1P35558 622 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 ETFBP38117 255 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 STK19P49842 368 aaPredicted RBP16.95■□□□□ 0.3
CDT1-202ENST00000562747 GNA12Q03113 381 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 ZBTB16Q05516 673 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 C9orf64Q5T6V5 341 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 H2AFVQ71UI9 128 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 NIPA2Q8N8Q9 360 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 TC2NQ8N9U0 490 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 CTNNBL1Q8WYA6 563 aaPredicted RBP16.95■□□□□ 0.3
CDT1-202ENST00000562747 ARHGEF26Q96DR7 871 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 RSPH9Q9H1X1 276 aaPredicted RBP16.95■□□□□ 0.3
CDT1-202ENST00000562747 CATSPERBQ9H7T0 1116 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 DNAAF2Q9NVR5 837 aaKnown RBP16.95■□□□□ 0.3
CDT1-202ENST00000562747 ANAPC7Q9UJX3 599 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 AP4E1Q9UPM8 1137 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 HS3ST2Q9Y278 367 aa16.95■□□□□ 0.3
CDT1-202ENST00000562747 FREM2Q5SZK8 3169 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 LAMA5O15230 3695 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 CXorf51AA0A1B0GTR3 108 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 WASH4PA8MWX3 477 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 CREB3O43889 395 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 RNASEH1O60930 286 aaKnown RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 IGLV3-19P01714 112 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 CAPNS1P04632 268 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 OXTRP30559 389 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 NUMBP49757 651 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 ZNF135P52742 658 aaPredicted RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 ZNF776Q68DI1 518 aaPredicted RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 RAB44Q7Z6P3 723 aaPredicted RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 SH2D3CQ8N5H7 860 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 RTL3Q8N8U3 475 aaKnown RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 OR7D4Q8NG98 312 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 ZNF564Q8TBZ8 553 aaPredicted RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 FRS2Q8WU20 508 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 PTPRN2Q92932 1015 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 PEBP4Q96S96 227 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 SNRNP25Q9BV90 132 aaKnown RBP16.94■□□□□ 0.3
CDT1-202ENST00000562747 MAGEH1Q9H213 219 aa16.94■□□□□ 0.3
CDT1-202ENST00000562747 MTG2Q9H4K7 406 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms