RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 ACVRL1P37023 503 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 MAGEA3P43357 314 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 MMP13P45452 471 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 GEMP55040 296 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 FAM193AP78312 1265 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 IFFO1Q0D2I5 559 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 BBS9Q3SYG4 887 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 RARS2Q5T160 578 aaKnown RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 IL31Q6EBC2 164 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 CXorf57Q6NSI4 855 aaKnown RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 GPR149Q86SP6 731 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 LINC00523Q86TU6 105 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 ZBED8Q8IZ13 594 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 CELF5Q8N6W0 485 aaKnown RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 C12orf76Q8N812 135 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 CNTD1Q8N815 330 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 USP33Q8TEY7 942 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 PABPC5Q96DU9 382 aaKnown RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 PWWP2AQ96N64 755 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 ACE2Q9BYF1 805 aaPredicted RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 SMG9Q9H0W8 520 aaKnown RBP14.56□□□□□ -0.08
COMMD4-205ENST00000562310 MUC3BQ9H195 1237 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 PRO3102Q9H379 93 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 PDFQ9HBH1 243 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 ATP13A1Q9HD20 1204 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 FAM53CQ9NYF3 392 aa14.56□□□□□ -0.08
COMMD4-205ENST00000562310 KIF26AQ9ULI4 1882 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 A0A087WUV0 522 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 J3KR12 359 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 PRAMEF12O95522 483 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 HLA-DQB2P05538 268 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 IVLP07476 585 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 GSTA2P09210 222 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 PHBP35232 272 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 GAD2Q05329 585 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 HYAL1Q12794 435 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 SLC29A2Q14542 456 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 ZNF235Q14590 738 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 LBRQ14739 615 aaKnown RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 SLC14A2Q15849 920 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 TCEAL5Q5H9L2 206 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 FNBP1LQ5T0N5 605 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 RNF219Q5W0B1 726 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 KCTD11Q693B1 232 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 NAPEPLDQ6IQ20 393 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 ANKRD54Q6NXT1 300 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 LRRC8BQ6P9F7 803 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 CAND1Q86VP6 1230 aaKnown RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 MFN1Q8IWA4 741 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 KRT222Q8N1A0 295 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 CARNMT1Q8N4J0 409 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 PDCD7Q8N8D1 485 aaKnown RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 DCAF4L2Q8NA75 395 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 TTC16Q8NEE8 873 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 OR7D4Q8NG98 312 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 ITFG1Q8TB96 612 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 DDI1Q8WTU0 396 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 PYROXD1Q8WU10 500 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 ING5Q8WYH8 240 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 C9orf72Q96LT7 481 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 CCDC77Q9BR77 488 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 TMEM109Q9BVC6 243 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 SLC25A51Q9H1U9 297 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 IGFLR1Q9H665 355 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 PPCSQ9HAB8 311 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 GDE1Q9NZC3 331 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 OGFRQ9NZT2 677 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 UBA2Q9UBT2 640 aaPredicted RBP14.55□□□□□ -0.08
COMMD4-205ENST00000562310 SEPT3Q9UH03 358 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 CCL26Q9Y258 94 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 NFS1Q9Y697 457 aa14.55□□□□□ -0.08
COMMD4-205ENST00000562310 MIA3Q5JRA6 1907 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 CHD9Q3L8U1 2897 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 CXorf51AA0A1B0GTR3 108 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 GOLGA8KD6RF30 607 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 RFXAPO00287 272 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 SCAMP3O14828 347 aaKnown RBP14.54□□□□□ -0.08
COMMD4-205ENST00000562310 ACSL3O95573 720 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 GLP2RO95838 553 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 CPP00450 1065 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 GEMIN4P57678 1058 aaKnown RBP14.54□□□□□ -0.08
COMMD4-205ENST00000562310 ZNF844Q08AG5 666 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 MPP3Q13368 585 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 SLC12A1Q13621 1099 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 KYNUQ16719 465 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 ZNF534Q76KX8 674 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 CCNJLQ8IV13 435 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 ARID3BQ8IVW6 561 aaPredicted RBP14.54□□□□□ -0.08
COMMD4-205ENST00000562310 NPAS3Q8IXF0 933 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 FBXO36Q8NEA4 188 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 GORASP1Q9BQQ3 440 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 NAT9Q9BTE0 207 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 SPON2Q9BUD6 331 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 POLR1EQ9GZS1 481 aaKnown RBP14.54□□□□□ -0.08
COMMD4-205ENST00000562310 ZNF576Q9H609 170 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 VPS45Q9NRW7 570 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 OBP2AQ9NY56 170 aa14.54□□□□□ -0.08
COMMD4-205ENST00000562310 TTLL3Q9Y4R7 772 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms