RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 COCHO43405 550 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 GREM1O60565 184 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MAFKO60675 156 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 AVILO75366 819 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 FGF18O76093 207 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CNTN5O94779 1100 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 OAS1P00973 400 aaKnown RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 AGTP01019 485 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 F11P03951 625 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 URODP06132 367 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CSH1P0DML2 217 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CSH2P0DML3 217 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SRGAP2BP0DMP2 458 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MLNP12872 115 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 RHOQP17081 205 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 NR1D1P20393 614 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MX2P20592 715 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CCNCP24863 283 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 PSMB4P28070 264 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SSTR1P30872 391 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SERPINB6P35237 376 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 PPM1AP35813 382 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ELK3P41970 407 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MMP13P45452 471 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TUBP50607 506 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 KCNQ1P51787 676 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MAGOHP61326 146 aaKnown RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CDK16Q00536 496 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TNK2Q07912 1038 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 IFFO1Q0D2I5 559 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 AP1B1Q10567 949 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 LONRF1Q17RB8 773 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SWI5Q1ZZU3 235 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 BBS9Q3SYG4 887 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CCDC38Q502W7 563 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TEX44Q53QW1 395 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ALFQ53S48 1182 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 FAM133BQ5BKY9 247 aaKnown RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 C10orf120Q5SQS8 335 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 HP1BP3Q5SSJ5 553 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SPOUT1Q5T280 376 aaKnown RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF385CQ66K41 422 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 STEAP4Q687X5 459 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 KIAA1841Q6NSI8 718 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 FBXL22Q6P050 247 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 PPP1R21Q6ZMI0 780 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 LYSMD3Q7Z3D4 306 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 EXOC3L1Q86VI1 746 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 RNF135Q8IUD6 432 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ANKMY2Q8IV38 441 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ZBED8Q8IZ13 594 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 PDIK1LQ8N165 341 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MPP5Q8N3R9 675 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TMEM151AQ8N4L1 468 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SVOPQ8N4V2 548 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 LZTR1Q8N653 840 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA6L1Q8N7Z2 621 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ATP6V0D2Q8N8Y2 350 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 KDF1Q8NAX2 398 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 FBXO36Q8NEA4 188 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 PDZD8Q8NEN9 1154 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MZB1Q8WU39 189 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ARNTL2Q8WYA1 636 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 IGSF8Q969P0 613 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 WBP2Q969T9 261 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 AZIN2Q96A70 460 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CELF6Q96J87 481 aaKnown RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 BTN2A3PQ96KV6 586 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TEKT5Q96M29 485 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 FAM161BQ96MY7 647 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 YME1L1Q96TA2 773 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MLPHQ9BV36 600 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CEP41Q9BYV8 373 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ACSS3Q9H6R3 686 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 ZNF334Q9HCZ1 680 aaPredicted RBP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TMEM248Q9NWD8 314 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 MPP6Q9NZW5 540 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 CTNNAL1Q9UBT7 734 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TTLL3Q9Y4R7 772 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 DENND4CQ5VZ89 1909 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 SHROOM3Q8TF72 1996 aa6.68□□□□□ -1.34
CAPN3-210ENST00000561817 TRIOBPQ9H2D6 2365 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA6L7A0A1B0GV03 622 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 LCHNA4D1U4 455 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 GOLGA6L10A6NI86 522 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 FOXO6A8MYZ6 492 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 IFRD1O00458 451 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MATN3O15232 486 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 RGS16O15492 202 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MTSS1O43312 755 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 ARHGEF15O94989 841 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 AP2A1O95782 977 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 OLFM2O95897 454 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 MOCS2O96007 188 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 APOEP02649 317 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 KLKB1P03952 638 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 APRTP07741 180 aa6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CNPP09543 421 aaKnown RBP6.67□□□□□ -1.34
CAPN3-210ENST00000561817 CREB1P16220 341 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms