RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 SERPINH1P50454 418 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ARSEP51690 589 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 CLCN6P51797 869 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 METAP1P53582 386 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 YBEYP58557 167 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 DPYSQ14117 519 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ELAVL3Q14576 367 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 POLD3Q15054 466 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 TCEAL1Q15170 157 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 CCDC6Q16204 474 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 CSRP2Q16527 193 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 SMTNL2Q2TAL5 461 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ACCSLQ4AC99 568 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 PEAR1Q5VY43 1037 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 AFMIDQ63HM1 303 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 IL31Q6EBC2 164 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 RETSATQ6NUM9 610 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 RFX8Q6ZV50 586 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 KIAA2013Q8IYS2 634 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 ATP11CQ8NB49 1132 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 OR2A12Q8NGT7 310 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC35G2Q8TBE7 412 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 FAM71BQ8TC56 605 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 FAM131CQ96AQ9 280 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 VOPP1Q96AW1 172 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 SMOC1Q9H4F8 434 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 LRRC19Q9H756 370 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 TMEM74BQ9NUR3 256 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 INTUQ9ULD6 942 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 PPM1HQ9ULR3 514 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 SCML1Q9UN30 329 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 DMXL1Q9Y485 3027 aa15.6■□□□□ 0.09
SNRPA1-213ENST00000560856 PI4KAP42356 2102 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 CEP192Q8TEP8 1941 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 RNF103O00237 685 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 DNTTP04053 509 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ERCC2P18074 760 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 IL4RP24394 825 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 CDC25BP30305 580 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 SLC8A1P32418 973 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF135P52742 658 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 TAS2R40P59535 323 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 CREB5Q02930 508 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ZNF33AQ06730 810 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 PPP6R3Q5H9R7 873 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 C22orf39Q6P5X5 142 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 USP30Q70CQ3 517 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ARMCX6Q7L4S7 300 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 POLNQ7Z5Q5 900 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 FAM124AQ86V42 546 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ARHGAP12Q8IWW6 846 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 AADATQ8N5Z0 425 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 GPR161Q8N6U8 529 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 TSC1Q92574 1164 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 HMCESQ96FZ2 354 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ANP32EQ9BTT0 268 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 GPR174Q9BXC1 333 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ZWILCHQ9H900 591 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 PCDH18Q9HCL0 1135 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 PILRBQ9UKJ0 227 aa15.59■□□□□ 0.09
SNRPA1-213ENST00000560856 ALOX15BO15296 676 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 RNASEH1O60930 286 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 NDUFS2O75306 463 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 CTSLP07711 333 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 C5AR1P21730 350 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 ITPKAP23677 461 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 MAN1A1P33908 653 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 DRD3P35462 400 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 PSMD8P48556 350 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 NDST2P52849 883 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 SERINC3Q13530 473 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 SF3A2Q15428 464 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 PARP15Q460N3 678 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 ATP13A4Q4VNC1 1196 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 LYSMD4Q5XG99 296 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 CYP2U1Q7Z449 544 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 CCDC170Q8IYT3 715 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 NPWQ8N729 165 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 CHST14Q8NCH0 376 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 CADM4Q8NFZ8 388 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 RFFLQ8WZ73 363 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 DNASE2BQ8WZ79 361 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 OR8D1Q8WZ84 308 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 HSPH1Q92598 858 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 PIGKQ92643 395 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 ISG20Q96AZ6 181 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 HSPA12BQ96MM6 686 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 CEP44Q9C0F1 390 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 SLC39A8Q9C0K1 460 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 NEUROG2Q9H2A3 272 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 TNKS2Q9H2K2 1166 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 ETNK2Q9NVF9 386 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 FBXL12Q9NXK8 326 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 FCF1Q9Y324 198 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 MFHAS1Q9Y4C4 1052 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 KNL1Q8NG31 2342 aa15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 NYNRINQ9P2P1 1898 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-213ENST00000560856 A0A1W2PP55 124 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms