RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 MAGEB5Q9BZ81 275 aa10.47□□□□□ -0.73
LDLR-214ENST00000560628 TOR4AQ9NXH8 423 aa10.47□□□□□ -0.73
LDLR-214ENST00000560628 ARHGAP20Q9P2F6 1191 aa10.47□□□□□ -0.73
LDLR-214ENST00000560628 HS3ST2Q9Y278 367 aa10.47□□□□□ -0.73
LDLR-214ENST00000560628 CA5BQ9Y2D0 317 aa10.47□□□□□ -0.73
LDLR-214ENST00000560628 SIK3Q9Y2K2 1263 aa10.47□□□□□ -0.73
LDLR-214ENST00000560628 FARP1Q9Y4F1 1045 aaPredicted RBP10.47□□□□□ -0.73
LDLR-214ENST00000560628 IGLV3-10A0A075B6K4 115 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 SRRM3A6NNA2 597 aaPredicted RBP10.46□□□□□ -0.73
LDLR-214ENST00000560628 ALOX15BO15296 676 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 SLC31A1O15431 190 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 SLC7A4O43246 635 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 TNFSF14O43557 240 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 LATO43561 262 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 PLRG1O43660 514 aaKnown RBP10.46□□□□□ -0.73
LDLR-214ENST00000560628 DFNA5O60443 496 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 RNGTTO60942 597 aaKnown RBP10.46□□□□□ -0.73
LDLR-214ENST00000560628 ITGAVP06756 1048 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 CDK11BP21127 795 aaKnown RBP10.46□□□□□ -0.73
LDLR-214ENST00000560628 MMP8P22894 467 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ADRA1BP35368 520 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 STAT1P42224 750 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 DNA2P51530 1060 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 JAM2P57087 298 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 TAS2R38P59533 333 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 BNIP3Q12983 259 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 CCDC14Q49A88 953 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 SLC45A4Q5BKX6 768 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ARSIQ5FYB1 569 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 C6orf118Q5T5N4 469 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 AGBL4Q5VU57 503 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 NAPEPLDQ6IQ20 393 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 RBM43Q6ZSC3 357 aaKnown RBP10.46□□□□□ -0.73
LDLR-214ENST00000560628 BNIPLQ7Z465 357 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ZNF677Q86XU0 584 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 SPATS2Q86XZ4 545 aaKnown RBP10.46□□□□□ -0.73
LDLR-214ENST00000560628 EID2Q8N6I1 236 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 MFSD2AQ8NA29 543 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 DCAF4L2Q8NA75 395 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ARRDC3Q96B67 414 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 GBP4Q96PP9 640 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 MYOCQ99972 504 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ZYG11BQ9C0D3 744 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 GDF3Q9NR23 364 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ANO10Q9NW15 660 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 ACTL7AQ9Y615 435 aa10.46□□□□□ -0.73
LDLR-214ENST00000560628 KMT2BQ9UMN6 2715 aaPredicted RBP10.46□□□□□ -0.74
LDLR-214ENST00000560628 A0A1W2PQU0 124 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ILVBLA1L0T0 632 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FAM149AA5PLN7 773 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 C2CD4BA6NLJ0 364 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FAM72CH0Y354 149 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 TAF4O00268 1085 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ZMPSTE24O75844 475 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 PRLRP16471 622 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 SDC4P31431 198 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ACVRL1P37023 503 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 RECQLP46063 649 aaPredicted RBP10.45□□□□□ -0.74
LDLR-214ENST00000560628 NXPH1P58417 271 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 GNA12Q03113 381 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 UBXN1Q04323 297 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 STAT4Q14765 748 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ACBD5Q5T8D3 534 aaPredicted RBP10.45□□□□□ -0.74
LDLR-214ENST00000560628 PIP5KL1Q5T9C9 394 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FAM72AQ5TYM5 149 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FAM72DQ6L9T8 149 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 RWDD4Q6NW29 188 aaKnown RBP10.45□□□□□ -0.74
LDLR-214ENST00000560628 DPY19L3Q6ZPD9 716 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ARCQ7LC44 396 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 TMPRSS7Q7RTY8 843 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FAM72BQ86X60 149 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 TMIEQ8NEW7 156 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ANKRD20A12PQ8NF67 263 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 NEK11Q8NG66 645 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 GRIN3AQ8TCU5 1115 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 SAP25Q8TEE9 199 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FAM131CQ96AQ9 280 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 CCDC114Q96M63 670 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ATP13A1Q9HD20 1204 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 DYRK4Q9NR20 520 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 SEPT11Q9NVA2 429 aaKnown RBP10.45□□□□□ -0.74
LDLR-214ENST00000560628 TMEM51Q9NW97 253 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ADAM22Q9P0K1 906 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 ZNF212Q9UDV6 495 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 FTSJ1Q9UET6 329 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 OR12D3Q9UGF7 316 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 LIMA1Q9UHB6 759 aaKnown RBP10.45□□□□□ -0.74
LDLR-214ENST00000560628 DNAI1Q9UI46 699 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 USP24Q9UPU5 2620 aa10.45□□□□□ -0.74
LDLR-214ENST00000560628 TMEM131Q92545 1883 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 FRYQ5TBA9 3013 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 CEP295Q9C0D2 2601 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 LGALS16A8MUM7 142 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 PRAMEF26H0Y7S4 382 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 ZNF821O75541 412 aaPredicted RBP10.44□□□□□ -0.74
LDLR-214ENST00000560628 LEFTY1O75610 366 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 DKK1O94907 266 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 PCDH8O95206 1070 aa10.44□□□□□ -0.74
LDLR-214ENST00000560628 LDOC1O95751 146 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms