RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CAMK1Q14012 370 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 IL31Q6EBC2 164 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 LILRA6Q6PI73 481 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TAOK1Q7L7X3 1001 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ARFGAP2Q8N6H7 521 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ST13P5Q8NFI4 369 aaPredicted RBP11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 SPPL3Q8TCT6 385 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ADAMTS19Q8TE59 1207 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TRMT2BQ96GJ1 504 aaKnown RBP11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 FCRL3Q96P31 734 aaPredicted RBP11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TSGA13Q96PP4 275 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 BRD8Q9H0E9 1235 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 LGALS13Q9UHV8 139 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 WASH4PA8MWX3 477 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 MTSS1O43312 755 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 CKMP06732 381 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ADH1AP07327 375 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 CA3P07451 260 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ERVK-10P10266 1014 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 KRT4P19013 534 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 DSC2Q02487 901 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ITPRIPL1Q6GPH6 555 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TRABD2AQ86V40 505 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 PGBD5Q8N414 524 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 SLC25A41Q8N5S1 370 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 BCAS4Q8TDM0 211 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 OVCA2Q8WZ82 227 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TCEAL4Q96EI5 215 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 EXOC2Q96KP1 924 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 IL12RB2Q99665 862 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 FICDQ9BVA6 458 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 PHACTR1Q9C0D0 580 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 TRABDQ9H4I3 376 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 GLOD4Q9HC38 313 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 INTS9Q9NV88 658 aaKnown RBP11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 RPS6KL1Q9Y6S9 549 aa11.08□□□□□ -0.64
SNRPA1-211ENST00000560433 MUSKO15146 869 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 GLUD1P00367 558 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 INHBAP08476 426 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 HTR7P34969 479 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 ABCG1P45844 678 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 KPNA1P52294 538 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 POU6F1Q14863 301 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 KLHL38Q2WGJ6 581 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 FSCBQ5H9T9 825 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 EMC10Q5UCC4 262 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 MARC1Q5VT66 337 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 TPGS1Q6ZTW0 290 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CROCCP2Q86T23 111 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 MRPL43Q8N983 215 aaKnown RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 GSDMBQ8TAX9 411 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 ATXN7L3BQ96GX2 97 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CDK5RAP1Q96SZ6 601 aaKnown RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 VAT1Q99536 393 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 STMN4Q9H169 189 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 TLR9Q9NR96 1032 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 HSFX1Q9UBD0 423 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 IKBKGQ9Y6K9 419 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 EPCAMP16422 314 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 RPA3P35244 121 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CD86P42081 329 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 NDST2P52849 883 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 NTHL1P78549 312 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CDK16Q00536 496 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 NIPAL4Q0D2K0 466 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 SERINC3Q13530 473 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CRYMQ14894 314 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 ADGRF1Q5T601 910 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 MROH9Q5TGP6 573 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 TIGD7Q6NT04 549 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 LINGO4Q6UY18 593 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 TMC8Q8IU68 726 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 PNPLA1Q8N8W4 532 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 ATXN2LQ8WWM7 1075 aaKnown RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 SERAC1Q96JX3 654 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 LBHD1Q9BQE6 289 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 FRMD8Q9BZ67 464 aaPredicted RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 EIF2B3Q9NR50 452 aaKnown RBP11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 SAMD15Q9P1V8 674 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 CCL26Q9Y258 94 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 PSAT1Q9Y617 370 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 MYOFQ9NZM1 2061 aa11.07□□□□□ -0.64
SNRPA1-211ENST00000560433 H3BNC9 293 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 CBX4O00257 560 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 ATP5DP30049 168 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 STX2P32856 288 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 GMPRP36959 345 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 PBX2P40425 430 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 CLCN4P51793 760 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 PRPSAP1Q14558 356 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 KLHDC10Q6PID8 442 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 ITIH5Q86UX2 942 aa11.06□□□□□ -0.64
SNRPA1-211ENST00000560433 LRRC6Q86X45 466 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms