RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	ITGA9	Q13797	1035 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	DSC3	Q14574	896 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	GRM3	Q14832	879 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	POU6F1	Q14863	301 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	TSNAXIP1	Q2TAA8	658 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	SNX30	Q5VWJ9	437 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	SMYD5	Q6GMV2	418 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	PM20D1	Q6GTS8	502 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	RGMB	Q6NW40	437 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	TIFAB	Q6ZNK6	161 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	MRPL10	Q7Z7H8	261 aa	Known RBP	5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	SCN4B	Q8IWT1	228 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	SLC25A41	Q8N5S1	370 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	RBM15B	Q8NDT2	890 aa	Known RBP	5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	KLHDC9	Q8NEP7	349 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	SCG3	Q8WXD2	468 aa	Known RBP	5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	NTAN1	Q96AB6	310 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	ZNF333	Q96JL9	665 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	FRMD8	Q9BZ67	464 aa	Predicted RBP	5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	TLE6	Q9H808	572 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	RNF186	Q9NXI6	227 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	RCOR3	Q9P2K3	495 aa	Predicted RBP	5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	PACSIN3	Q9UKS6	424 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	ACTL7A	Q9Y615	435 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	WASF2	Q9Y6W5	498 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	PLXNA3	P51805	1871 aa		5.88	□□□□□ -1.47
LRRC49-223	ENST00000560369	THSD7B	Q9C0I4	1608 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369		A0A1W2PQH9	124 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TMEM88B	A6NKF7	163 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369		B2RBV5	119 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TK2	O00142	265 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TRAFD1	O14545	582 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ZNF195	O14628	629 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TNFRSF10B	O14763	440 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	KLF11	O14901	512 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TBX10	O75333	385 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ATP5H	O75947	161 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CNTN5	O94779	1100 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TGDS	O95455	350 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CHRNG	P07510	517 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	UBTFL6	P0CB48	400 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	MLN	P12872	115 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ACADS	P16219	412 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	SLC1A6	P48664	564 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	MAX	P61244	160 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	MPP1	Q00013	466 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	SLC39A12	Q504Y0	691 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ZNF789	Q5FWF6	425 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CLLU1OS	Q5K130	101 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	WASHC2D	Q5SRD0	308 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ARMC3	Q5W041	872 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CWF19L1	Q69YN2	538 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	OVOS1	Q6IE37	1185 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	DENND5A	Q6IQ26	1287 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ESRP1	Q6NXG1	681 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	RPS27L	Q71UM5	84 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TFAP2D	Q7Z6R9	452 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TMEM135	Q86UB9	458 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CIR1	Q86X95	450 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CCNJL	Q8IV13	435 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	KBTBD2	Q8IY47	623 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	IPMK	Q8NFU5	416 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	FAM136A	Q96C01	138 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TEKT5	Q96M29	485 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	C7orf26	Q96N11	449 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	RBBP8	Q99708	897 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	BTBD10	Q9BSF8	475 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CCDC106	Q9BWC9	280 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	GBA3	Q9H227	469 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	CRISPLD1	Q9H336	500 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	NOL6	Q9H6R4	1146 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	EIF2B3	Q9NR50	452 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	C20orf96	Q9NUD7	363 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	MKS1	Q9NXB0	559 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ETAA1	Q9NY74	926 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ABI2	Q9NYB9	513 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	LNPEP	Q9UIQ6	1025 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	GIT1	Q9Y2X7	761 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	PRG3	Q9Y2Y8	225 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369		Q9Y3F1	56 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369		A0A0U1RQF3	1178 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	MANSC4	A6NHS7	340 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369		G3V2L1	256 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	GYG2	O15488	501 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	MAFK	O60675	156 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	PMPCB	O75439	489 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	IGLV3-25	P01717	112 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	JUN	P05412	331 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	HLA-DQB2	P05538	268 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	POLB	P06746	335 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	GSTA2	P09210	222 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ESRRA	P11474	423 aa	Predicted RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	ARNT	P27540	789 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	GRIK1	P39086	918 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	SLC25A3	Q00325	362 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	DLG1	Q12959	904 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	RBBP5	Q15291	538 aa	Known RBP	5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	PCSK7	Q16549	785 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TCTN1	Q2MV58	587 aa		5.87	□□□□□ -1.47
LRRC49-223	ENST00000560369	TRIM71	Q2Q1W2	868 aa	Known RBP	5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms