RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 AKT3Q9Y243 479 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FAM32AQ9Y421 112 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 ZNF451Q9Y4E5 1061 aa6.1□□□□□ -1.43
SNRPA1-209ENST00000560307 FER1L6Q2WGJ9 1857 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 LRRC37AA6NMS7 1700 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ARHGEF35A5YM69 484 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TRIM43BA6NCK2 446 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CAPN8A6NHC0 703 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TRIM64BA6NI03 449 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 E5RJQ4 531 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 K7ENM7 598 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 MEIS1O00470 390 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CHADO15335 359 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TBX1O43435 398 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GLRA3O75311 464 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 DEAF1O75398 565 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PSMD10O75832 226 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 KRT38O76015 456 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 DRD2P14416 443 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PTPN2P17706 415 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PSMC3P17980 439 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 POU3F3P20264 500 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ITGAXP20702 1163 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GRK2P25098 689 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SSTR1P30872 391 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 NTF4P34130 210 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GRIK1P39086 918 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 BTDP43251 543 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ASPAP45381 313 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GABRB2P47870 512 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GCLMP48507 274 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 NUMBP49757 651 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 BCAP31P51572 246 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 STAT2P52630 851 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 AQP5P55064 265 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RPS3AP61247 264 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RPS8P62241 208 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ESRRGP62508 458 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 NOMO3P69849 1222 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 DLG4P78352 724 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GTF2BQ00403 316 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CNTN2Q02246 1040 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 NAB1Q13506 487 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PIGHQ14442 188 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SLBPQ14493 270 aaKnown RBP eCLIP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RFTN1Q14699 578 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CHI3L2Q15782 390 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 INSCQ1MX18 579 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 QRICH1Q2TAL8 776 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PRR16Q569H4 304 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 NOL9Q5SY16 702 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 LCE5AQ5TCM9 118 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 LINC00299Q6ZSB3 139 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CYS1Q717R9 158 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RHPN2Q8IUC4 686 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 MAPKAPK5Q8IW41 473 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RAVER1Q8IY67 606 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 COLGALT2Q8IYK4 626 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 THNSL1Q8IYQ7 743 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 FBXL13Q8NEE6 735 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TNIP2Q8NFZ5 429 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TSPAN14Q8NG11 270 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RIN3Q8TB24 985 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 FEZF2Q8TBJ5 459 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GIPC3Q8TF64 312 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PRPF31Q8WWY3 499 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CASP10Q92851 521 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ISL2Q96A47 359 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 HSPBAP1Q96EW2 488 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 DUS3LQ96G46 650 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SNX27Q96L92 541 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CCDC17Q96LX7 622 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ZNF597Q96LX8 424 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 RILPQ96NA2 401 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PRPF18Q99633 342 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 DOK1Q99704 481 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SMAD5Q99717 465 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SENP7Q9BQF6 1050 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 HEMGNQ9BXL5 484 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 GCOM2Q9BZD3 368 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PDZD7Q9H5P4 517 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 C8orf4Q9NR00 106 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PNPLA3Q9NST1 481 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 PARVAQ9NVD7 372 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 DDX18Q9NVP1 670 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 UTP6Q9NYH9 597 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TMOD2Q9NZR1 351 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 ADGRE2Q9UHX3 823 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 HERC5Q9UII4 1024 aaKnown RBP6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 CROTQ9UKG9 612 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SYNPO2Q9UMS6 1093 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 SLC8A2Q9UPR5 921 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 COQ6Q9Y2Z9 468 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 TEX264Q9Y6I9 313 aa6.09□□□□□ -1.43
SNRPA1-209ENST00000560307 IGLV3-22A0A075B6J6 115 aa6.08□□□□□ -1.44
SNRPA1-209ENST00000560307 A0A087WXM4 84 aa6.08□□□□□ -1.44
SNRPA1-209ENST00000560307 GOLGA8QA0A0J9YX86 632 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms