RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 ATP11CQ8NB49 1132 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CCNYQ8ND76 341 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 CYB5D2Q8WUJ1 264 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 NSMCE1Q8WV22 266 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 SORCS1Q8WY21 1168 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 FATE1Q969F0 183 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 RPL10LQ96L21 214 aaKnown RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 ZNF599Q96NL3 588 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 NAP1L3Q99457 506 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 FRMD8P1Q9BZ68 369 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 CHRDQ9H2X0 955 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 SP110Q9HB58 689 aa12.52□□□□□ -0.41
USP8-209ENST00000560297 TTC7AQ9ULT0 858 aaPredicted RBP12.52□□□□□ -0.41
USP8-209ENST00000560297 HACD1B0YJ81 288 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 ZNF189O75820 626 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 KLF8O95600 359 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 PDGFBP01127 241 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 CHRM1P11229 460 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 GLDCP23378 1020 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 ARF5P84085 180 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 ACCSLQ4AC99 568 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 CWF19L1Q69YN2 538 aaKnown RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 NPNTQ6UXI9 565 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 SERPINA13PQ6UXR4 307 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 SYT10Q6XYQ8 523 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 TP53INP2Q8IXH6 220 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 PLPP6Q8IY26 295 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 RASGEF1CQ8N431 466 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 FBXL6Q8N531 539 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 ALLCQ8N6M5 410 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 RPLP0P6Q8NHW5 317 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 ISG20Q96AZ6 181 aaKnown RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 HDAC11Q96DB2 347 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 MRGPRX3Q96LB0 322 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 OLFM3Q96PB7 478 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 FERMT1Q9BQL6 677 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 TMEM245Q9H330 911 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 HAUS2Q9NVX0 235 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 SAE1Q9UBE0 346 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 UBA2Q9UBT2 640 aaPredicted RBP12.51□□□□□ -0.41
USP8-209ENST00000560297 SLCO3A1Q9UIG8 710 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 HCN2Q9UL51 889 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 SAR1BQ9Y6B6 198 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 STON1Q9Y6Q2 735 aa12.51□□□□□ -0.41
USP8-209ENST00000560297 VCANP13611 3396 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 TARSL2A2RTX5 802 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 J3KR12 359 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 MATN3O15232 486 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 MTSS1O43312 755 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 SYNCRIPO60506 623 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 MT-CO1P00395 513 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 FGGP02679 453 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 DCNP07585 359 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 SRCP12931 536 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 DEKP35659 375 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 IL12RB1P42701 662 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 NUMBP49757 651 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 SERPINH1P50454 418 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 RENBPP51606 427 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 PPIDQ08752 370 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 DLG2Q15700 870 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 LONRF2Q1L5Z9 754 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 HNRNPA1L2Q32P51 320 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 LINGO4Q6UY18 593 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 SYT13Q7L8C5 426 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 TXNDC5Q8NBS9 432 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 NETO2Q8NC67 525 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 ACTL9Q8TC94 416 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 ACTRT1Q8TDG2 376 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 TFB1MQ8WVM0 346 aaKnown RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 HAUS1Q96CS2 278 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 MYO19Q96H55 970 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 C16orf45Q96MC5 204 aaPredicted RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 ACOX2Q99424 681 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 GABRG3Q99928 467 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 HERPUD2Q9BSE4 406 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 C1QTNF1Q9BXJ1 281 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 PDFQ9HBH1 243 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 HOMER3Q9NSC5 361 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 CACNA2D2Q9NY47 1150 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 DLGAP2Q9P1A6 1054 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 RNF14Q9UBS8 474 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 MMP17Q9ULZ9 603 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
USP8-209ENST00000560297 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
USP8-209ENST00000560297 EDDM13A0A1B0GTR0 161 aa12.49□□□□□ -0.41
USP8-209ENST00000560297 TTC34A8MYJ7 566 aa12.49□□□□□ -0.41
USP8-209ENST00000560297 WASH3PC4AMC7 463 aa12.49□□□□□ -0.41
USP8-209ENST00000560297 H7C0C1 242 aa12.49□□□□□ -0.41
USP8-209ENST00000560297 MCF2LO15068 1137 aa12.49□□□□□ -0.41
USP8-209ENST00000560297 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms