RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ITIH5Q86UX2 942 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 MPP5Q8N3R9 675 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 PSMG2Q969U7 264 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 ZNF512Q96ME7 567 aaPredicted RBP18.17■□□□□ 0.5
SNX1-208ENST00000559844 CEP41Q9BYV8 373 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 NMUR1Q9HB89 426 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 COMMD8Q9NX08 183 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 SFMBT1Q9UHJ3 866 aa18.17■□□□□ 0.5
SNX1-208ENST00000559844 XYLBO75191 536 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 TBX10O75333 385 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 RTN3O95197 1032 aaPredicted RBP18.16■□□□□ 0.5
SNX1-208ENST00000559844 SNRPAP09012 282 aaKnown RBP18.16■□□□□ 0.5
SNX1-208ENST00000559844 CSH1P0DML2 217 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 CSH2P0DML3 217 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 PGAM1P18669 254 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 SERPINB9P50453 376 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 CTC1Q2NKJ3 1217 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 ANKRD54Q6NXT1 300 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 BANPQ8N9N5 519 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 PPM1EQ8WY54 764 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 MTBPQ96DY7 904 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 APOL5Q9BWW9 433 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 PRKD2Q9BZL6 878 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 SIK2Q9H0K1 926 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 GBA3Q9H227 469 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 PLAC1Q9HBJ0 212 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 FGFR1OP2Q9NVK5 253 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 IL37Q9NZH6 218 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 ASB3Q9Y575 518 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 DENND4CQ5VZ89 1909 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 NOTCH4Q99466 2003 aa18.16■□□□□ 0.5
SNX1-208ENST00000559844 SNX3O60493 162 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 PIAS1O75925 651 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 KRT38O76015 456 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 SUN1O94901 812 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 TAC1P20366 129 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 DLX2Q07687 328 aaPredicted RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 PDK4Q16654 411 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 TEX44Q53QW1 395 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 RARS2Q5T160 578 aaKnown RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 RNF187Q5TA31 235 aaPredicted RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 MANEALQ5VSG8 457 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 ZNF707Q96C28 371 aaPredicted RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 PABPC5Q96DU9 382 aaKnown RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 TSGA13Q96PP4 275 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 MOCS1Q9NZB8 636 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 CLEC1BQ9P126 229 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 TLR6Q9Y2C9 796 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 KCNU1A8MYU2 1149 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 F5H423 210 aaPredicted RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 AP3B1O00203 1094 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 PSMD3O43242 534 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 ALDH1A2O94788 518 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 AP2A1O95782 977 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 HMGA1P17096 107 aaKnown RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 CCNCP24863 283 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 CNTFP26441 200 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 YWHAQP27348 245 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 PSEN1P49768 467 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 SLC18A2Q05940 514 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 NAB1Q13506 487 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 PRPSAP1Q14558 356 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 COL19A1Q14993 1142 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 CASC4Q6P4E1 433 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 SMG7Q92540 1137 aaKnown RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 CDKL2Q92772 493 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 TTC17Q96AE7 1141 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 APOPT1Q96IL0 206 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 FCRL2Q96LA5 508 aaPredicted RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 C1orf74Q96LT6 269 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 CORO1BQ9BR76 489 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 PLCD4Q9BRC7 762 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 PIDD1Q9HB75 910 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 OLA1Q9NTK5 396 aaKnown RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 HCFC1R1Q9NWW0 138 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 NEU3Q9UQ49 428 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 USP15Q9Y4E8 981 aaPredicted RBP18.15■□□□□ 0.5
SNX1-208ENST00000559844 ANAPC1Q9H1A4 1944 aa18.15■□□□□ 0.5
SNX1-208ENST00000559844 FAM92AA1XBS5 289 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 ZBTB24O43167 697 aaPredicted RBP18.14■□□□□ 0.49
SNX1-208ENST00000559844 MSI1O43347 362 aaKnown RBP18.14■□□□□ 0.49
SNX1-208ENST00000559844 OAS1P00973 400 aaKnown RBP18.14■□□□□ 0.49
SNX1-208ENST00000559844 MGAT1P26572 445 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 SESN2P58004 480 aaPredicted RBP18.14■□□□□ 0.49
SNX1-208ENST00000559844 SKIV2LQ15477 1246 aaKnown RBP18.14■□□□□ 0.49
SNX1-208ENST00000559844 SLC1A5Q15758 541 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 SYCE2Q6PIF2 218 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 LVRNQ6Q4G3 990 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 LRRC8CQ8TDW0 803 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 DEPDC1BQ8WUY9 529 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 TEKT5Q96M29 485 aa18.14■□□□□ 0.49
SNX1-208ENST00000559844 CXorf49A8MYA2 514 aaPredicted RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 ALADP13716 330 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 HOXB8P17481 243 aaPredicted RBP18.13■□□□□ 0.49
SNX1-208ENST00000559844 FOXN2P32314 431 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 LTBRP36941 435 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 PGFP49763 221 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 ZNF449Q6P9G9 518 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 HS6ST3Q8IZP7 471 aa18.13■□□□□ 0.49
SNX1-208ENST00000559844 ATPAF2Q8N5M1 289 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms