RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TBC1D3GQ6DHY5 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3CQ6IPX1 549 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 PSAPL1Q6NUJ1 521 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 NCEH1Q6PIU2 408 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 TBC1D3Q8IZP1 549 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 PYROXD2Q8N2H3 581 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 RYBPQ8N488 228 aaPredicted RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 AADATQ8N5Z0 425 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 OR14C36Q8NHC7 312 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 PIP4K2CQ8TBX8 421 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 GRIN3AQ8TCU5 1115 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 DNASE2BQ8WZ79 361 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 BIRC7Q96CA5 298 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 IQCDQ96DY2 449 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 EPAS1Q99814 870 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 XPO4Q9C0E2 1151 aaKnown RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 NEUROG2Q9H2A3 272 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 TNKS2Q9H2K2 1166 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 DHX35Q9H5Z1 703 aaKnown RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 CAPN10Q9HC96 672 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 DYRK4Q9NR20 520 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 GPATCH2LQ9NWQ4 482 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 PCSK1NQ9UHG2 260 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 FZD4Q9ULV1 537 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 HPCAL4Q9UM19 191 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 AP4E1Q9UPM8 1137 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 HS3ST2Q9Y278 367 aa8.38□□□□□ -1.07
SNX1-207ENST00000559401 LUC7L2Q9Y383 392 aaKnown RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 BZW2Q9Y6E2 419 aaKnown RBP8.38□□□□□ -1.07
SNX1-207ENST00000559401 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 A0A1B0GVT2 93 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 A0A1W2PQJ5 194 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 MCF2LO15068 1137 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 ALOX15BO15296 676 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 DAPK3O43293 454 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 SMAD6O43541 496 aaKnown RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 PRPSAP2O60256 369 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 KCNK5O95279 499 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 GYPCP04921 128 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 SERPING1P05155 500 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 TPM1P09493 284 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 MYBL1P10243 752 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 GZMAP12544 262 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 GOT1P17174 413 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 CD27P26842 260 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 CASP14P31944 242 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 L1CAMP32004 1257 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 CHRNA3P32297 505 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 PBX1P40424 430 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 CSNK1EP49674 416 aaKnown RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 SERPINH1P50454 418 aaKnown RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 VASPP50552 380 aaPredicted RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 CLCN6P51797 869 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 AFF3P51826 1226 aaKnown RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 METAP1P53582 386 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 GALCP54803 685 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 ADPRHP54922 357 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 AIF1P55008 147 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 TPI1P60174 286 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 OGDHQ02218 1023 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 SCAPQ12770 1279 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 POLD3Q15054 466 aaPredicted RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 MANEALQ5VSG8 457 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 PLEKHA7Q6IQ23 1121 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 LAYNQ6UX15 382 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 ZNF783Q6ZMS7 281 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 LEKR1Q6ZMV7 388 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 DEFB124Q8NES8 71 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 OR2T34Q8NGX1 318 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 TM6SF2Q9BZW4 377 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 TRIM7Q9C029 511 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 MAGEH1Q9H213 219 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 SLC32A1Q9H598 525 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 CATSPERBQ9H7T0 1116 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 MRPL47Q9HD33 250 aaKnown RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 TM9SF3Q9HD45 589 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 AASDHPPTQ9NRN7 309 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 NDFIP2Q9NV92 336 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 TMEM248Q9NWD8 314 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 ADAMTS1Q9UHI8 967 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 SARDHQ9UL12 918 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 FZD10Q9ULW2 581 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 CAPN11Q9UMQ6 739 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 FCF1Q9Y324 198 aaKnown RBP8.37□□□□□ -1.07
SNX1-207ENST00000559401 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.37□□□□□ -1.07
SNX1-207ENST00000559401 CACNA1AO00555 2505 aa8.37□□□□□ -1.07
SNX1-207ENST00000559401 DMXL1Q9Y485 3027 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 CHD5Q8TDI0 1954 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 TMEM191CA6NGB0 347 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 EEF2KO00418 725 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 FGF10O15520 208 aaPredicted RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 BUB1O43683 1085 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 CER1O95813 267 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 PRNPP04156 253 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 IGHV4-34P06331 123 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 MAT2AP31153 395 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 DRD3P35462 400 aa8.36□□□□□ -1.07
SNX1-207ENST00000559401 SSR1P43307 286 aaKnown RBP8.36□□□□□ -1.07
SNX1-207ENST00000559401 C21orf59P57076 290 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms