RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 DLG2Q15700 870 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 HADHQ16836 314 aaKnown RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 FAM182AQ5T1J6 154 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 DCAF12L1Q5VU92 463 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 C22orf39Q6P5X5 142 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 MFSD7Q6UXD7 560 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 ZNF662Q6ZS27 426 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 KIAA1328Q86T90 577 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 LONP2Q86WA8 852 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 CACUL1Q86Y37 369 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 STK40Q8N2I9 435 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 CHST14Q8NCH0 376 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 OR2T3Q8NH03 318 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 LRRN4Q8WUT4 740 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 RLN3Q8WXF3 142 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 PRRX2Q99811 253 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 C2orf49Q9BVC5 232 aaPredicted RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 RSPH9Q9H1X1 276 aaPredicted RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 USP36Q9P275 1121 aaKnown RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 LHX3Q9UBR4 397 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 SERGEFQ9UGK8 458 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 SARDHQ9UL12 918 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 PLA2G4CQ9UP65 541 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 INVSQ9Y283 1065 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 PCDHGA2Q9Y5H1 932 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 SPAG17Q6Q759 2223 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 ANKRD36A6QL64 1941 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 GPR179Q6PRD1 2367 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 LRRD1A4D1F6 860 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 GOLGA6L6A8MZA4 724 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 ZNF487B1APH4 448 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 MUSKO15146 869 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 DDX3YO15523 660 aaKnown RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 PSTPIP1O43586 416 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 PRAMEF11O60813 436 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 GJB3O75712 270 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 PALMO75781 387 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 MAP3K6O95382 1288 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 KRT1P04264 644 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 CTNNA1P35221 906 aaKnown RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 P2RY2P41231 377 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 CDKN2BP42772 138 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 RGRP47804 291 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 KRT81Q14533 505 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 PAFAH1B3Q15102 231 aaKnown RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 PDK2Q15119 407 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 CYTH1Q15438 398 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 PARP15Q460N3 678 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 SLC9A4Q6AI14 798 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 IL31Q6EBC2 164 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 AADACL2Q6P093 401 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 DAAM2Q86T65 1068 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 TMPRSS6Q8IU80 811 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 CCDC117Q8IWD4 279 aaPredicted RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 RHOT1Q8IXI2 618 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 KATNAL2Q8IYT4 538 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 SUMF1Q8NBK3 374 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 OR2A12Q8NGT7 310 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 RNF25Q96BH1 459 aaPredicted RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 RNF157Q96PX1 679 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 CALN1Q9BXU9 219 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 FAM126AQ9BYI3 521 aaPredicted RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 TNKS2Q9H2K2 1166 aa11.67□□□□□ -0.54
SNX1-204ENST00000559061 PACSIN2Q9UNF0 486 aaPredicted RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
SNX1-204ENST00000559061 IGHV1OR15-9A0A0B4J2B8 117 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 EDDM13A0A1B0GTR0 161 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 CXorf51AA0A1B0GTR3 108 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 PROB1E7EW31 1015 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 PLK4O00444 970 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 SPOPO43791 374 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 MAFKO60675 156 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 TMCC1O94876 653 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 IPO7O95373 1038 aaKnown RBP11.66□□□□□ -0.54
SNX1-204ENST00000559061 FTCDO95954 541 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 IGLV3-19P01714 112 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 TNNT1P13805 278 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 CTNNA2P26232 953 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 ARL4AP40617 200 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 GALNT2Q10471 571 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 IHHQ14623 411 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 LLGL1Q15334 1064 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 TMCO3Q6UWJ1 677 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 NPNTQ6UXI9 565 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 SPOCD1Q6ZMY3 1216 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 VSIG1Q86XK7 387 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 REXO1L1PQ8IX06 675 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 PGBD5Q8N414 524 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 AADATQ8N5Z0 425 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 KCTD6Q8NC69 237 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 GAB3Q8WWW8 586 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 ATOH1Q92858 354 aaPredicted RBP11.66□□□□□ -0.54
SNX1-204ENST00000559061 FAM131CQ96AQ9 280 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 PPP1R9BQ96SB3 815 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 EPC1Q9H2F5 836 aa11.66□□□□□ -0.54
SNX1-204ENST00000559061 POLMQ9NP87 494 aaPredicted RBP11.66□□□□□ -0.54
SNX1-204ENST00000559061 LUC7LQ9NQ29 371 aaKnown RBP11.66□□□□□ -0.54
SNX1-204ENST00000559061 DTLQ9NZJ0 730 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms