RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SEMA3AQ14563 771 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 IL13RA2Q14627 380 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 C5orf22Q49AR2 442 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 EPHA10Q5JZY3 1008 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 SLC30A9Q6PML9 568 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 KLHL24Q6TFL4 600 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 RTL10Q7L3V2 364 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 MDGA2Q7Z553 956 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 NEK8Q86SG6 692 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 GLCCI1Q86VQ1 547 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 MON1AQ86VX9 555 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 RHPN2Q8IUC4 686 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 ADSSL1Q8N142 457 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 GHDCQ8N2G8 530 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 ANKRD52Q8NB46 1076 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 METTL6Q8TCB7 284 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 HSPH1Q92598 858 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 ADAD1Q96M93 576 aaKnown RBP4.76□□□□□ -1.65
CASC4-206ENST00000558847 ASB2Q96Q27 587 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 TEFMQ96QE5 360 aaKnown RBP4.76□□□□□ -1.65
CASC4-206ENST00000558847 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.76□□□□□ -1.65
CASC4-206ENST00000558847 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.76□□□□□ -1.65
CASC4-206ENST00000558847 RANBP17Q9H2T7 1088 aaKnown RBP4.76□□□□□ -1.65
CASC4-206ENST00000558847 TMEM248Q9NWD8 314 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 IL1RAPL1Q9NZN1 696 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 CAMK2AQ9UQM7 478 aa4.76□□□□□ -1.65
CASC4-206ENST00000558847 ZNF335Q9H4Z2 1342 aaPredicted RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 KDM3AQ9Y4C1 1321 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 LRRC3CA6NJW4 275 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 INPPL1O15357 1258 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 PROP1O75360 226 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 IGLV2-14P01704 120 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 ALOX12P18054 663 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 TYK2P29597 1187 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 CHRNA5P30532 468 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 DRG2P55039 364 aaKnown RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 UFM1P61960 85 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 RPL7AP62424 266 aaKnown RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 EFNB1P98172 346 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 NEXNQ0ZGT2 675 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 SLC18A3Q16572 532 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 AP5B1Q2VPB7 878 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 PLK5Q496M5 336 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 SH2D4BQ5SQS7 431 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 FAM171A1Q5VUB5 890 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 TMEM268Q5VZI3 342 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 LRIG3Q6UXM1 1119 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 RBM44Q6ZP01 1051 aaKnown RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 IGFN1Q86VF2 1251 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 ARHGEF25Q86VW2 580 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 CPXM2Q8N436 756 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 SCAIQ8N9R8 606 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 C2CD4CQ8TF44 421 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 FCRL5Q96RD9 977 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 NR1H4Q96RI1 486 aaPredicted RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 NUDT16L1Q9BRJ7 211 aaKnown RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 SLC25A18Q9H1K4 315 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 CCDC68Q9H2F9 335 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 SYNCQ9H7C4 482 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 TLR8Q9NR97 1041 aaKnown RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 TTLL3Q9Y4R7 772 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 CLDN16Q9Y5I7 305 aa4.75□□□□□ -1.65
CASC4-206ENST00000558847 COL11A2P13942 1736 aaPredicted RBP4.75□□□□□ -1.65
CASC4-206ENST00000558847 POLR2AP24928 1970 aaKnown RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 TEX13CA0A0J9YWL9 993 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 GTPBP1O00178 669 aaKnown RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 MSI1O43347 362 aaKnown RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 TNFSF14O43557 240 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 TIMM44O43615 452 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 URODP06132 367 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 CYP2D6P10635 497 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 IRF1P10914 325 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 LAMP2P13473 410 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 IDUAP35475 653 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 SOX2P48431 317 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 CTCFP49711 727 aaPredicted RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 CYP2J2P51589 502 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 YWHAZP63104 245 aaKnown RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 RHAGQ02094 409 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 NHLH1Q02575 133 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 GOLGA8DPQ0D2H9 430 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 MTA1Q13330 715 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 GALNT3Q14435 633 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 KCTD2Q14681 263 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 TBCEQ15813 527 aaPredicted RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 SLC45A4Q5BKX6 768 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 TMEM81Q6P7N7 255 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 IL20RBQ6UXL0 311 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 ZNF813Q6ZN06 617 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 AMIGO2Q86SJ2 522 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 TICAM2Q86XR7 235 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 EXD3Q8N9H8 876 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 PNLDC1Q8NA58 520 aaKnown RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 FAM110DQ8TAY7 271 aaPredicted RBP4.74□□□□□ -1.65
CASC4-206ENST00000558847 ZNF398Q8TD17 642 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 NEK9Q8TD19 979 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 KLHL29Q96CT2 875 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 CLMNQ96JQ2 1002 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 RITA1Q96K30 269 aa4.74□□□□□ -1.65
CASC4-206ENST00000558847 ZNF347Q96SE7 839 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms