RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 ZNF211Q13398 564 aaPredicted RBP17.81■□□□□ 0.44
TPM1-214ENST00000558544 TFDP3Q5H9I0 405 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 MEI1Q5TIA1 1274 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 SLC9A4Q6AI14 798 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 KIAA1211LQ6NV74 962 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 AADACL2Q6P093 401 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 PLD5Q8N7P1 536 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 ATP11CQ8NB49 1132 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 KDM1BQ8NB78 822 aa17.81■□□□□ 0.44
TPM1-214ENST00000558544 PRMT8Q9NR22 394 aaPredicted RBP17.81■□□□□ 0.44
TPM1-214ENST00000558544 A0A1W2PQF6 199 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 J3KR12 359 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 SMAD6O43541 496 aaKnown RBP17.8■□□□□ 0.44
TPM1-214ENST00000558544 CD160O95971 181 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 PYGMP11217 842 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 SERPINH1P50454 418 aaKnown RBP17.8■□□□□ 0.44
TPM1-214ENST00000558544 COPS2P61201 443 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 ADCY2Q08462 1091 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 STARD3Q14849 445 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 PPP2R5EQ16537 467 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 HNRNPA1L2Q32P51 320 aaKnown RBP17.8■□□□□ 0.44
TPM1-214ENST00000558544 ACCSLQ4AC99 568 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 DCAF12L1Q5VU92 463 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 TSSK4Q6SA08 328 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 NPNTQ6UXI9 565 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 MAMSTRQ6ZN01 415 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 MAML2Q8IZL2 1156 aaPredicted RBP17.8■□□□□ 0.44
TPM1-214ENST00000558544 TSTD1Q8NFU3 115 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 SP110Q9HB58 689 aa17.8■□□□□ 0.44
TPM1-214ENST00000558544 POLMQ9NP87 494 aaPredicted RBP17.8■□□□□ 0.44
TPM1-214ENST00000558544 TCRBV21S2A2A0A5A6 115 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 GOLGA6L9A6NEM1 432 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 K7ESF4 209 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 ATP9BO43861 1147 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 SYNCRIPO60506 623 aaKnown RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 CST8O60676 142 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 PRAMEF11O60813 436 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 PAPSS2O95340 614 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 VAV1P15498 845 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 ZFXP17010 805 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 VASPP50552 380 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 DGKEP52429 567 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 GEMIN4P57678 1058 aaKnown RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 SLC10A2Q12908 348 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 TFDP2Q14188 446 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 RPS6KA1Q15418 735 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 DLG2Q15700 870 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 ZNF569Q5MCW4 686 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 ATPAF2Q8N5M1 289 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 HERPUD2Q9BSE4 406 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 HEMGNQ9BXL5 484 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 PDFQ9HBH1 243 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 CD248Q9HCU0 757 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 DTLQ9NZJ0 730 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 SUN2Q9UH99 717 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 IPO11Q9UI26 975 aaKnown RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 FCF1Q9Y324 198 aaKnown RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 HEY1Q9Y5J3 304 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 EDDM13A0A1B0GTR0 161 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 ZSCAN5CA6NGD5 496 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 KIF5CO60282 957 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 SIN3BO75182 1162 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 PTPN7P35236 360 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 CETN2P41208 172 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 CLCN6P51797 869 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 CSTF1Q05048 431 aaKnown RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 SLC20A2Q08357 652 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 ANGPT1Q15389 498 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 ANO7Q6IWH7 933 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 C22orf39Q6P5X5 142 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 Q6ZVU0 165 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 SLC35F6Q8N357 371 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 C17orf53Q8N3J3 647 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 FRS2Q8WU20 508 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 PTPRN2Q92932 1015 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 OSBPL8Q9BZF1 889 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 PRDM16Q9HAZ2 1276 aa17.79■□□□□ 0.44
TPM1-214ENST00000558544 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 UBA2Q9UBT2 640 aaPredicted RBP17.79■□□□□ 0.44
TPM1-214ENST00000558544 FANCMQ8IYD8 2048 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 CXorf51AA0A1B0GTR3 108 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 BNIP3LO60238 219 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 TMCC1O94876 653 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 APBB3O95704 486 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 GARSP41250 739 aaKnown RBP17.78■□□□□ 0.44
TPM1-214ENST00000558544 PXNP49023 591 aaPredicted RBP17.78■□□□□ 0.44
TPM1-214ENST00000558544 IL10RBQ08334 325 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 GALNT2Q10471 571 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 CAMK2GQ13555 558 aaPredicted RBP17.78■□□□□ 0.44
TPM1-214ENST00000558544 CACUL1Q86Y37 369 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 LRRN4Q8WUT4 740 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 UBE2Q2Q8WVN8 375 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 HMGB4Q8WW32 186 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 HAUS1Q96CS2 278 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 TLR10Q9BXR5 811 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 SLC6A17Q9H1V8 727 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 TNKS2Q9H2K2 1166 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 PRSS16Q9NQE7 514 aa17.78■□□□□ 0.44
TPM1-214ENST00000558544 PLXND1Q9Y4D7 1925 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms