RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 NDST2P52849 883 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 RPS14P62263 151 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 SLC20A2Q08357 652 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 DPYSQ14117 519 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 ELAVL3Q14576 367 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 ELF2Q15723 593 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 PARP15Q460N3 678 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 ATP13A4Q4VNC1 1196 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 METTL3Q86U44 580 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 KCTD6Q8NC69 237 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 HINFPQ9BQA5 517 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 DUSP15Q9H1R2 295 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 RSPH9Q9H1X1 276 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 KLHL11Q9NVR0 708 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 USP36Q9P275 1121 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 MBD1Q9UIS9 605 aaPredicted RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 GMEB2Q9UKD1 530 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 REXO2Q9Y3B8 237 aaKnown RBP12.62□□□□□ -0.39
SMAD3-205ENST00000558428 ACTL7AQ9Y615 435 aa12.62□□□□□ -0.39
SMAD3-205ENST00000558428 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 A0A0A6YYK5 440 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 RCCD1A6NED2 376 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 ZSCAN5CA6NGD5 496 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 ARHGAP42A6NI28 874 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 BUB1O43683 1085 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 SPOPO43791 374 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 RHOBTB1O94844 696 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 CD160O95971 181 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 CD48P09326 243 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 SLC1A1P43005 524 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 PSMD8P48556 350 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 TPMTP51580 245 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 VAV2P52735 878 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 HADHBP55084 474 aaKnown RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 ZBTB16Q05516 673 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 SERINC3Q13530 473 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 TTC31Q49AM3 519 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 PMS2CLQ68D20 193 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 LAIR1Q6GTX8 287 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 TMCO3Q6UWJ1 677 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 SLC36A4Q6YBV0 504 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 LEKR1Q6ZMV7 388 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 DSG4Q86SJ6 1040 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 KIAA1328Q86T90 577 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 ALYREFQ86V81 257 aaKnown RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 MMAAQ8IVH4 418 aaKnown RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 MAP7D3Q8IWC1 876 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 NPWQ8N729 165 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 NETO2Q8NC67 525 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 OR8D1Q8WZ84 308 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 TSC1Q92574 1164 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 ZC3H10Q96K80 434 aaKnown RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 CCDC114Q96M63 670 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 FAM129BQ96TA1 746 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 CALN1Q9BXU9 219 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 SLC39A8Q9C0K1 460 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 KLC2Q9H0B6 622 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 LRRC19Q9H756 370 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 RCOR3Q9P2K3 495 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 NCDNQ9UBB6 729 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 FCF1Q9Y324 198 aaKnown RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-205ENST00000558428 HYOU1Q9Y4L1 999 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 PI4KAP42356 2102 aa12.61□□□□□ -0.39
SMAD3-205ENST00000558428 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 CXorf51AA0A1B0GTR3 108 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 DFFAO00273 331 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 MID1O15344 667 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 BUB1BO60566 1050 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 NDUFS2O75306 463 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 IL1BP01584 269 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 TNNT1P13805 278 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 COMTP21964 271 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 CD6P30203 668 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 RECQLP46063 649 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 PAPOLAP51003 745 aaKnown RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 DNA2P51530 1060 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 ARSEP51690 589 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 RPL6Q02878 288 aaKnown RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 DPYSL3Q14195 570 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 PDK2Q15119 407 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 CST6Q15828 149 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 LPCAT2Q7L5N7 544 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 FAM124AQ86V42 546 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 ARHGAP12Q8IWW6 846 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 LZTR1Q8N653 840 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 PCDH20Q8N6Y1 951 aaKnown RBP12.6□□□□□ -0.39
SMAD3-205ENST00000558428 OR2A12Q8NGT7 310 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 FAM71BQ8TC56 605 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 GANCQ8TET4 914 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 RUBCNQ92622 972 aa12.6□□□□□ -0.39
SMAD3-205ENST00000558428 TOE1Q96GM8 510 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms