RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 SIN3BO75182 1162 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 ENDOD1O94919 500 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 TPM3P06753 285 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 UNGP13051 313 aaPredicted RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 FLT3P36888 993 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 RECQLP46063 649 aaPredicted RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 CLEC16AQ2KHT3 1053 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 SKOR2Q2VWA4 1001 aaPredicted RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 DCAF12L1Q5VU92 463 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 CXorf57Q6NSI4 855 aaKnown RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 DNAJC24Q6P3W2 148 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 BNIPLQ7Z465 357 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 DHX40Q8IX18 779 aaKnown RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 SLC20A1Q8WUM9 679 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 MRGPRX3Q96LB0 322 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 AGPAT1Q99943 283 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 GTPBP2Q9BX10 602 aaKnown RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 ZYG11BQ9C0D3 744 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 SLC6A17Q9H1V8 727 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 METTL5Q9NRN9 209 aaKnown RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 TMEM74BQ9NUR3 256 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 DNAAF2Q9NVR5 837 aaKnown RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 FBXL12Q9NXK8 326 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 HS3ST2Q9Y278 367 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 GON4LQ3T8J9 2241 aa11.71□□□□□ -0.54
LINC00648-204ENST00000557749 CNOT1A5YKK6 2376 aaKnown RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 DCHS1Q96JQ0 3298 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ATXN2Q99700 1313 aaKnown RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 MED19A0JLT2 244 aaPredicted RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ILVBLA1L0T0 632 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 PATE3B3GLJ2 98 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 EIF3CLB5ME19 914 aaKnown RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 E9PAM4 449 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 KCNK5O95279 499 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ADCY5O95622 1261 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 SERPINC1P01008 464 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ZNF883P0CG24 379 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 GOT1P17174 413 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 CD27P26842 260 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 OR1E1P30953 314 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 HTR7P34969 479 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 MAPK8P45983 427 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 GRIA4P48058 902 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 KLK7P49862 253 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 NOVA1P51513 510 aaKnown RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 INAVAQ3KP66 663 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ACCSLQ4AC99 568 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 C9orf64Q5T6V5 341 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 OTUD1Q5VV17 481 aaPredicted RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 FAM124AQ86V42 546 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 VPS36Q86VN1 386 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ZSCAN30Q86W11 494 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 CACUL1Q86Y37 369 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 APCDD1Q8J025 514 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 DEFB119Q8N690 84 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 ZNF366Q8N895 744 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 OR2T34Q8NGX1 318 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 SNX19Q92543 992 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 IGSF8Q969P0 613 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 NTAN1Q96AB6 310 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 TRIM11Q96F44 468 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 MYO19Q96H55 970 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 CFAP57Q96MR6 1250 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 EIF3CQ99613 913 aaKnown RBP11.7□□□□□ -0.54
LINC00648-204ENST00000557749 CEP44Q9C0F1 390 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 MIR1-1HGQ9H1L0 117 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 OSBPL2Q9H1P3 480 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 CACNA1EQ15878 2313 aa11.7□□□□□ -0.54
LINC00648-204ENST00000557749 C2CD4BA6NLJ0 364 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 SIGLEC16A6NMB1 481 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 TTC34A8MYJ7 566 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 CDX4O14627 284 aaPredicted RBP11.69□□□□□ -0.54
LINC00648-204ENST00000557749 EPHB6O15197 1021 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 LZTS3O60299 673 aaPredicted RBP11.69□□□□□ -0.54
LINC00648-204ENST00000557749 MAGEC1O60732 1142 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 RNASEH2AO75792 299 aaKnown RBP11.69□□□□□ -0.54
LINC00648-204ENST00000557749 DKK1O94907 266 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 TRIM16O95361 564 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 IL1BP01584 269 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 IL2RAP01589 272 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 PRNPP04156 253 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 CHRNB2P17787 502 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 TNFAIP3P21580 790 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 GPD1P21695 349 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 MZF1P28698 734 aaPredicted RBP11.69□□□□□ -0.54
LINC00648-204ENST00000557749 SLC8A1P32418 973 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 CCR5P51681 352 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 ATP11AP98196 1134 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 SUZ12Q15022 739 aaKnown RBP11.69□□□□□ -0.54
LINC00648-204ENST00000557749 ASIC2Q16515 512 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 UAP1L1Q3KQV9 507 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 FIGNQ5HY92 759 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 EFHC2Q5JST6 749 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 KIAA0895LQ68EN5 471 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 ZNF787Q6DD87 383 aa11.69□□□□□ -0.54
LINC00648-204ENST00000557749 DCUN1D2Q6PH85 259 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms