RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 TCRBV21S2A2A0A5A6 115 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 GOLGA6L9A6NEM1 432 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 WASH3PC4AMC7 463 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 MCF2LO15068 1137 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 BUB1O43683 1085 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 PRAMEF11O60813 436 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 SRCP12931 536 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 AMPD1P23109 780 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 MSNP26038 577 aaKnown RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 OXTRP30559 389 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 RWDD2BP57060 319 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 IL10RBQ08334 325 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 TCF15Q12870 199 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 GRM3Q14832 879 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 PPP2R5EQ16537 467 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 ATP13A4Q4VNC1 1196 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 TFDP3Q5H9I0 405 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 C9orf64Q5T6V5 341 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 FAM46CQ5VWP2 391 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 TIGD7Q6NT04 549 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 TMPRSS6Q8IU80 811 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 BBS5Q8N3I7 341 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 NSMCE1Q8WV22 266 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 RAPGEF5Q92565 580 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 PTPRN2Q92932 1015 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 RPL10LQ96L21 214 aaKnown RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 ZNF830Q96NB3 372 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 KLC2Q9H0B6 622 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 RSPH9Q9H1X1 276 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 PRSS16Q9NQE7 514 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 AMACRQ9UHK6 382 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
SHMT2-234ENST00000557703 PPP2R2CQ9Y2T4 447 aa13.97□□□□□ -0.17
SHMT2-234ENST00000557703 GRID2IPA4D2P6 1211 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 C3orf70A6NLC5 250 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ADH1BP00325 375 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 GSRP00390 522 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 IGLV3-19P01714 112 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ACADMP11310 421 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 PRKCHP24723 683 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 PTPN7P35236 360 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ACVRL1P37023 503 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 HSPA9P38646 679 aaKnown RBP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 NBL1P41271 181 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 CSNK1DP48730 415 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 RENBPP51606 427 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 SNRPD1P62314 119 aaKnown RBP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 RAD51Q06609 339 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 NSUN2Q08J23 767 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 TTC31Q49AM3 519 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ACCSLQ4AC99 568 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 RALGPS1Q5JS13 557 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ZNF776Q68DI1 518 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 SLC9A4Q6AI14 798 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 SLC36A4Q6YBV0 504 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 USP30Q70CQ3 517 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 NT5DC3Q86UY8 548 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ZNF354CQ86Y25 554 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 ARHGAP12Q8IWW6 846 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 TMIEQ8NEW7 156 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 PRSS33Q8NF86 280 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 MDGA1Q8NFP4 955 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 PCDH19Q8TAB3 1148 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 OR8D1Q8WZ84 308 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 SIPA1Q96FS4 1042 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 HMCESQ96FZ2 354 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 SPACA7Q96KW9 195 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 MRGPRX1Q96LB2 322 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 TSGA13Q96PP4 275 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 HHIPQ96QV1 700 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 SLC39A8Q9C0K1 460 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 PCED1AQ9H1Q7 454 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 BCCIPQ9P287 314 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHMT2-234ENST00000557703 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 FANCMQ8IYD8 2048 aa13.96□□□□□ -0.17
SHMT2-234ENST00000557703 WDFY4Q6ZS81 3184 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 TTC34A8MYJ7 566 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 PROB1E7EW31 1015 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 APOL1O14791 398 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 SNAP91O60641 907 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 PALMO75781 387 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 DNTTP04053 509 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 PRNPP04156 253 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 KRT1P04264 644 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 GABRG2P18507 467 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 CES1P23141 567 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 CCNCP24863 283 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 GJC1P36383 396 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 DPP6P42658 865 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 CDKN2BP42772 138 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 CTSOP43234 321 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-234ENST00000557703 MAPK8P45983 427 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 PEX5P50542 639 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 PAPOLAP51003 745 aaKnown RBP13.95□□□□□ -0.18
SHMT2-234ENST00000557703 COPAP53621 1224 aa13.95□□□□□ -0.18
SHMT2-234ENST00000557703 ARF5P84085 180 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms