RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 GOT1P17174 413 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 NNMTP40261 264 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF143P52747 638 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-224ENST00000556737 KRT83P78385 493 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 GNA12Q03113 381 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 ARL13BQ3SXY8 428 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 AGBL4Q5VU57 503 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 C22orf39Q6P5X5 142 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 LAYNQ6UX15 382 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 LINGO4Q6UY18 593 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 ZNF783Q6ZMS7 281 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 HDDC3Q8N4P3 179 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 DEFB124Q8NES8 71 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 OR2A12Q8NGT7 310 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 OR2T34Q8NGX1 318 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 OR8D1Q8WZ84 308 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 SNX19Q92543 992 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 TBC1D31Q96DN5 1066 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 PPP1R9BQ96SB3 815 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 HAUS4Q9H6D7 363 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 IL21RQ9HBE5 538 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 TMEM248Q9NWD8 314 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 OR12D3Q9UGF7 316 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 PPM1HQ9ULR3 514 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 NCKAP1Q9Y2A7 1128 aa10.57□□□□□ -0.72
SHMT2-224ENST00000556737 ASPMQ8IZT6 3477 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 SPEGQ15772 3267 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 A0A1B0GVT2 93 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 A0A1W2PQJ5 194 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 MCF2LO15068 1137 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 OPHN1O60890 802 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 PLEKP08567 350 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 TPM1P09493 284 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 CD27P26842 260 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 CDC25BP30305 580 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ACVRL1P37023 503 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 GRIA4P48058 902 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 MAPKAPK2P49137 400 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 SERPINH1P50454 418 aaKnown RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 CLCN6P51797 869 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 AFF3P51826 1226 aaKnown RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ATXN3P54252 364 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 PPP2CBP62714 309 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 PPP2CAP67775 309 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 MAMLD1Q13495 774 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ACCSLQ4AC99 568 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 SFMBT2Q5VUG0 894 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 HGSNATQ68CP4 663 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 PLEKHA7Q6IQ23 1121 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 CYP4V2Q6ZWL3 525 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 PYROXD2Q8N2H3 581 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ATP11CQ8NB49 1132 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 CHST14Q8NCH0 376 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 PIP4K2CQ8TBX8 421 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 GANCQ8TET4 914 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 VOPP1Q96AW1 172 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 TRIM44Q96DX7 344 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 VCPIP1Q96JH7 1222 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 SLC6A18Q96N87 628 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 OMDQ99983 421 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 CNPY3Q9BT09 278 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ACE2Q9BYF1 805 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 EDEM3Q9BZQ6 932 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 TRIM7Q9C029 511 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ZDHHC5Q9C0B5 715 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 NOL6Q9H6R4 1146 aaKnown RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ATP13A1Q9HD20 1204 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 WASF3Q9UPY6 502 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 FNDC3AQ9Y2H6 1198 aaKnown RBP10.56□□□□□ -0.72
SHMT2-224ENST00000556737 ACTL7AQ9Y615 435 aa10.56□□□□□ -0.72
SHMT2-224ENST00000556737 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 A0A1W2PPC4 97 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 FAM47DPA6NHR8 397 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 LRRC72A6NJI9 287 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 TMCO5BA8MYB1 307 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CBX4O00257 560 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 WNT9AO14904 365 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 SLC7A4O43246 635 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 LATO43561 262 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 PLRG1O43660 514 aaKnown RBP10.55□□□□□ -0.72
SHMT2-224ENST00000556737 RTN2O75298 545 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CEACAM1P13688 526 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 TNFAIP3P21580 790 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CSNK1EP49674 416 aaKnown RBP10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CCR5P51681 352 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 TAS2R38P59533 333 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 FAM193AP78312 1265 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 KLHL30Q0D2K2 578 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CNTN1Q12860 1018 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 POM121L1PQ3SYA9 428 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 KCNT1Q5JUK3 1230 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 PIP5KL1Q5T9C9 394 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 RWDD4Q6NW29 188 aaKnown RBP10.55□□□□□ -0.72
SHMT2-224ENST00000556737 SLFN11Q7Z7L1 901 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 DSG4Q86SJ6 1040 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 ARFGAP1Q8N6T3 406 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 ARHGEF2Q92974 986 aaKnown RBP10.55□□□□□ -0.72
SHMT2-224ENST00000556737 ARRDC3Q96B67 414 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 PEBP4Q96S96 227 aa10.55□□□□□ -0.72
SHMT2-224ENST00000556737 CEP44Q9C0F1 390 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms