RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	UBAP2L	Q14157	1087 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PMF1	Q6P1K2	205 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CAND1	Q86VP6	1230 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF555	Q8NEP9	628 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PPTC7	Q8NI37	304 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PHF21B	Q96EK2	531 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	TRPC7	Q9HCX4	862 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	GIMAP4	Q9NUV9	329 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	USE1	Q9NZ43	259 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CDY1	Q9Y6F8	540 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	SAC3D1	A6NKF1	404 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	AP3B1	O00203	1094 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	METTL18	O95568	372 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	BPGM	P07738	259 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PLK1	P53350	603 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	LAMB3	Q13751	1172 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF410	Q86VK4	478 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CCDC103	Q8IW40	242 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	MFN1	Q8IWA4	741 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	HS6ST3	Q8IZP7	471 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	DEFB106A	Q8N104	65 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	MPP5	Q8N3R9	675 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PQLC3	Q8N755	202 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	NDRG1	Q92597	394 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	CELF6	Q96J87	481 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	ATXN3L	Q9H3M9	355 aa		12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	FAM32A	Q9Y421	112 aa	Known RBP	12.49	□□□□□ -0.41
TMPO-212	ENST00000556029	PRR5-ARHGAP8	B1AHC4	643 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	KCNK1	O00180	336 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	PRKAR2A	P13861	404 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ACADSB	P45954	432 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ARHGAP8	P85298	464 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	TRMT5	Q32P41	509 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	CCDC92	Q53HC0	331 aa	Predicted RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	RIPOR1	Q6ZS17	1223 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SAPCD2	Q86UD0	394 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	BLOC1S5	Q8TDH9	187 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	TFB1M	Q8WVM0	346 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SENP8	Q96LD8	212 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF670	Q9BS34	389 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	HBS1L	Q9Y450	684 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	PCDHA11	Q9Y5I1	949 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	WASF2	Q9Y6W5	498 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	KIAA1217	Q5T5P2	1943 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	KAT6A	Q92794	2004 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF197	O14709	1029 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	USP12	O75317	370 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	RFPL1	O75677	317 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	AKT1	P31749	480 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC10A6	Q3KNW5	377 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	TAF2	Q6P1X5	1199 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	TRAF7	Q6Q0C0	670 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ATPAF2	Q8N5M1	289 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	CATSPER1	Q8NEC5	780 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	UCMA	Q8WVF2	138 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	MRPL45	Q9BRJ2	306 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	TRIM54	Q9BYV2	358 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	PAIP1	Q9H074	479 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	WDCP	Q9H6R7	721 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ST3GAL5	Q9UNP4	418 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SCAMP3	O14828	347 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	LYPLA1	O75608	230 aa	Predicted RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	DLGAP3	O95886	979 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	BDNF	P23560	247 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	CRHR1	P34998	444 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	GRIA1	P42261	906 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	RABGGTB	P53611	331 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	C16orf72	Q14CZ0	275 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SH3D19	Q5HYK7	790 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ULK2	Q8IYT8	1036 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ZNF184	Q99676	751 aa	Predicted RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	LPIN3	Q9BQK8	851 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	R3HDML	Q9H3Y0	253 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	EML4	Q9HC35	981 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC30A1	Q9Y6M5	507 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SDR42E2	A6NKP2	422 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SRP72	O76094	671 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ODC1	P11926	461 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	PRKCH	P24723	683 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	DNAJB2	P25686	324 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SERPINB1	P30740	379 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	PPP3CC	P48454	512 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	BST2	Q10589	180 aa	Known RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	ZBTB49	Q6ZSB9	765 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	C11orf96	Q7Z7L8	435 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	TREML1	Q86YW5	311 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	SOCS4	Q8WXH5	440 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	PDZD7	Q9H5P4	517 aa		12.48	□□□□□ -0.41
TMPO-212	ENST00000556029	IGKV6-21	A0A0C4DH24	114 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	GLRA3	O75311	464 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	TOP3B	O95985	862 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	LINGO3	P0C6S8	592 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	HSMCR30	P0CW71	290 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	SLC1A6	P48664	564 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	MRPS5	P82675	430 aa	Known RBP	12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	C10orf120	Q5SQS8	335 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	TTC23L	Q6PF05	361 aa		12.47	□□□□□ -0.41
TMPO-212	ENST00000556029	C16orf89	Q6UX73	402 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms