RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	SOX2	P48431	317 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	EFNB1	P98172	346 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	DCTN2	Q13561	401 aa	Known RBP	4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	DPY19L2P1	Q6NXN4	242 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	FBXO42	Q6P3S6	717 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	C16orf54	Q6UWD8	224 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	KLB	Q86Z14	1044 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	PAQR4	Q8N4S7	273 aa	Predicted RBP	4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	PLD5	Q8N7P1	536 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	SCAI	Q8N9R8	606 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	SETD9	Q8NE22	299 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	CREB3L4	Q8TEY5	395 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	ZFPM2	Q8WW38	1151 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	VOPP1	Q96AW1	172 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	SAAL1	Q96ER3	474 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	RSRC1	Q96IZ7	334 aa	Known RBP	4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	RANBP17	Q9H2T7	1088 aa	Known RBP	4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	BRF2	Q9HAW0	419 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	CPNE5	Q9HCH3	593 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506		Q9N2J8	555 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	IL17RB	Q9NRM6	502 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	NSMCE4A	Q9NXX6	385 aa		4.71	□□□□□ -1.66
KTN1-222	ENST00000555506	C17orf113	A0A1B0GUU1	675 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	TMEM247	A6NEH6	219 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	KCNJ18	B7U540	433 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RRH	O14718	337 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	FIBP	O43427	364 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	STRN	O43815	780 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	PTP4A3	O75365	173 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RPS6KB1	P23443	525 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	MAPK4	P31152	587 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	ARL3	P36405	182 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RPS3A	P61247	264 aa	Known RBP	4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RHAG	Q02094	409 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	ZBTB16	Q05516	673 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	MAMLD1	Q13495	774 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	ARL13A	Q5H913	290 aa	Predicted RBP	4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	AKNAD1	Q5T1N1	836 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	C10orf76	Q5T2E6	689 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	C17orf99	Q6UX52	265 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	CCDC129	Q6ZRS4	1044 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RRM2B	Q7LG56	351 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RD3	Q7Z3Z2	195 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	NEK8	Q86SG6	692 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	UEVLD	Q8IX04	471 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	SNRNP27	Q8WVK2	155 aa	Known RBP	4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	RITA1	Q96K30	269 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	FCRL5	Q96RD9	977 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	DUSP26	Q9BV47	211 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	ITPA	Q9BY32	194 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	PCDHB16	Q9NRJ7	776 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	CLIC5	Q9NZA1	410 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	IL1RAPL1	Q9NZN1	696 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	PEMT	Q9UBM1	199 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	SERGEF	Q9UGK8	458 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	COX11	Q9Y6N1	276 aa		4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	COL11A2	P13942	1736 aa	Predicted RBP	4.7	□□□□□ -1.66
KTN1-222	ENST00000555506	TEX13C	A0A0J9YWL9	993 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506		A0A1W2PQM1	296 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TCRBV7S3A2	A0A539	114 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TGFB1I1	O43294	461 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CEP104	O60308	925 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CCNDBP1	O95273	360 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	FCGR2A	P12318	317 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	GPD1	P21695	349 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CD72	P21854	359 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TACR3	P29371	465 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	BSG	P35613	385 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	MLH1	P40692	756 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	EIF3B	P55884	814 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	NEXN	Q0ZGT2	675 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CERKL	Q49MI3	558 aa	Predicted RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	SLC9B1	Q4ZJI4	515 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	ZNF667	Q5HYK9	610 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	VWA5B1	Q5TIE3	1220 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TTLL5	Q6EMB2	1281 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	TMEM81	Q6P7N7	255 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	RBM44	Q6ZP01	1051 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	BHLHA9	Q7RTU4	235 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	AMIGO2	Q86SJ2	522 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CHSY1	Q86X52	802 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CNTROB	Q8N137	903 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CPXM2	Q8N436	756 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	BOLL	Q8N9W6	283 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	FAM47B	Q8NA70	645 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	IP6K1	Q92551	441 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	HSPH1	Q92598	858 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	SARAF	Q96BY9	339 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	KLHL29	Q96CT2	875 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	CCDC68	Q9H2F9	335 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	KLK15	Q9H2R5	256 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	GHITM	Q9H3K2	345 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	SLC32A1	Q9H598	525 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	FBXO4	Q9UKT5	387 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	DHDH	Q9UQ10	334 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	WNT6	Q9Y6F9	365 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	RPS6KL1	Q9Y6S9	549 aa		4.69	□□□□□ -1.66
KTN1-222	ENST00000555506	POLR2A	P24928	1970 aa	Known RBP	4.69	□□□□□ -1.66

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