RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 CTSLP07711 333 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 PSMD8P48556 350 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 SERPINH1P50454 418 aaKnown RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 KRT83P78385 493 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 SPEM2Q0P670 501 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 POLD3Q15054 466 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 POM121L1PQ3SYA9 428 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 BOLA3Q53S33 107 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 AFMIDQ63HM1 303 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 LAIR1Q6GTX8 287 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 SLC41A1Q8IVJ1 513 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 CCDC170Q8IYT3 715 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 UMODL1-AS1Q8N2C9 162 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 AADATQ8N5Z0 425 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 OR2A12Q8NGT7 310 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 TEKT4Q8WW24 435 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 TOE1Q96GM8 510 aaKnown RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 CSPG4P5Q96PW8 444 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 EIF3CQ99613 913 aaKnown RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 MAGEH1Q9H213 219 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 ARRDC1-AS1Q9H2J1 176 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 CATSPERBQ9H7T0 1116 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 NCDNQ9UBB6 729 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 DUSP10Q9Y6W6 482 aa12.62□□□□□ -0.39
SYNE2-214ENST00000554928 EP300Q09472 2414 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 ATXN2Q99700 1313 aaKnown RBP12.62□□□□□ -0.39
SYNE2-214ENST00000554928 PIEZO1Q92508 2521 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 TARSL2A2RTX5 802 aaKnown RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 J3KR12 359 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 FGF10O15520 208 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 ZBTB24O43167 697 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 KDELR3O43731 214 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 EPN2O95208 641 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 GKP32189 559 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 ACSL1P33121 698 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 DHPSP49366 369 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 CDH6P55285 790 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 RPL6Q02878 288 aaKnown RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 E2F5Q15329 346 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 CST6Q15828 149 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 ZNF776Q68DI1 518 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 METTL3Q86U44 580 aaKnown RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 TMTC1Q8IUR5 882 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 PSTKQ8IV42 348 aaKnown RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 FAM71BQ8TC56 605 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 RAPGEF5Q92565 580 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 RUBCNQ92622 972 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 SPACA7Q96KW9 195 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 BAG1Q99933 345 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 HINFPQ9BQA5 517 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 DESI2Q9BSY9 194 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 TM6SF2Q9BZW4 377 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 LACRTQ9GZZ8 138 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 PABPC3Q9H361 631 aaKnown RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 WSB2Q9NYS7 404 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 RAB23Q9ULC3 237 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 INTUQ9ULD6 942 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 SLCO1B1Q9Y6L6 691 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 WDR87Q6ZQQ6 2873 aa12.61□□□□□ -0.39
SYNE2-214ENST00000554928 RIF1Q5UIP0 2472 aaKnown RBP12.61□□□□□ -0.39
SYNE2-214ENST00000554928 NYNRINQ9P2P1 1898 aaKnown RBP12.6□□□□□ -0.39
SYNE2-214ENST00000554928 A0A1W2PP55 124 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 PATE3B3GLJ2 98 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 H3BRJ5 948 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 DAPK3O43293 454 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 BUB1BO60566 1050 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-214ENST00000554928 ZNF217O75362 1048 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 IGLV3-19P01714 112 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 RETP07949 1114 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 ACADMP11310 421 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 CD6P30203 668 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 SLC8A1P32418 973 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 MAN1A1P33908 653 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 HTR7P34969 479 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 DRD3P35462 400 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 CYLC1P35663 651 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-214ENST00000554928 NNMTP40261 264 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 HCAR3P49019 387 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 PAPOLAP51003 745 aaKnown RBP12.6□□□□□ -0.39
SYNE2-214ENST00000554928 SERINC3Q13530 473 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 DPYSL3Q14195 570 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 FAM182AQ5T1J6 154 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 ATXN7L2Q5T6C5 722 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-214ENST00000554928 TCEAL6Q6IPX3 200 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 RETSATQ6NUM9 610 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 DPY19L3Q6ZPD9 716 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 ZNF354CQ86Y25 554 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 RHOT2Q8IXI1 618 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 OR6K2Q8NGY2 324 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 LRRN4Q8WUT4 740 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 TCEAL3Q969E4 200 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 NCAPGQ9BPX3 1015 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 GPR174Q9BXC1 333 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
SYNE2-214ENST00000554928 C6orf106Q9H6K1 298 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-214ENST00000554928 RETREG1Q9H6L5 497 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms