RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 WNT8BQ93098 351 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 NACC2Q96BF6 587 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 SETD4Q9NVD3 440 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 ATP6V1HQ9UI12 483 aa14.16□□□□□ -0.14
VTI1B-204ENST00000554659 CORO1CQ9ULV4 474 aaPredicted RBP14.16□□□□□ -0.14
VTI1B-204ENST00000554659 RGSL1A5PLK6 1076 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ALOX15BO15296 676 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 LTFP02788 710 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 VCLP18206 1134 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 APOBEC3HQ6NTF7 200 aaKnown RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 NPNTQ6UXI9 565 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 GLT6D1Q7Z4J2 308 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 KRT73Q86Y46 540 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ADHFE1Q8IWW8 467 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF276Q8N554 614 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 HGH1Q9BTY7 390 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 USP20Q9Y2K6 914 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 EDF1O60869 148 aaKnown RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ATP5F1P24539 256 aaPredicted RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 CYP2C18P33260 490 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 RPL5P46777 297 aaKnown RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TSNQ15631 228 aaKnown RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 NRF1Q16656 503 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 FAM117BQ6P1L5 589 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TRABD2AQ86V40 505 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TMEM161BQ8NDZ6 487 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TSPAN14Q8NG11 270 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 RDH11Q8TC12 318 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 HASPINQ8TF76 798 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ACP6Q9NPH0 428 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 KLHL1Q9NR64 748 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 KLHL28Q9NXS3 571 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TNPO3Q9Y5L0 923 aaKnown RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TRIM38O00635 465 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 USP12O75317 370 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ALDH1A2O94788 518 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 IL6P05231 212 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 CLTBP09497 229 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 PLK1P53350 603 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 FCGRTP55899 365 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TKTL2Q9H0I9 626 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ARIH1Q9Y4X5 557 aaPredicted RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 MROH1Q8NDA8 1641 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 MEIS2O14770 477 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 FGF10O15520 208 aaPredicted RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 SNRPB2P08579 225 aaKnown RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 CDC25CP30307 473 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 NAGLUP54802 743 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 XIAPP98170 497 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 NBPF12Q5TAG4 269 aaPredicted RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 OR52K1Q8NGK4 314 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 ZNF670Q9BS34 389 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 SPAG4Q9NPE6 437 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 SH3BP4Q9P0V3 963 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 TMCO1Q9UM00 188 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 MTF2Q9Y483 593 aaPredicted RBP14.15□□□□□ -0.14
VTI1B-204ENST00000554659 SNCAIPQ9Y6H5 919 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 STON1Q9Y6Q2 735 aa14.15□□□□□ -0.14
VTI1B-204ENST00000554659 RECQL5O94762 991 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 CCDC130P13994 396 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 AKAP5P24588 427 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 GUCA1AP43080 201 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 NOMO3P69849 1222 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ITGADQ13349 1161 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 C15orf59Q2T9L4 293 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 AADATQ8N5Z0 425 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ATP13A1Q9HD20 1204 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TIMM13Q9Y5L4 95 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ARHGAP23Q9P227 1491 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PDE9AO76083 593 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 NUMBP49757 651 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TTC23Q5W5X9 447 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 STK40Q8N2I9 435 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TMEM86AQ8N2M4 240 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ADAM32Q8TC27 787 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 VMP1Q96GC9 406 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 INVSQ9Y283 1065 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ATRNO75882 1429 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 LIN7AO14910 233 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PABPC1P11940 636 aaKnown RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 S100A3P33764 101 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 GABRB2P47870 512 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 ITGA1P56199 1179 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PSME3P61289 254 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TGM3Q08188 693 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TAF5Q15542 800 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 UCMAQ8WVF2 138 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PTCD3Q96EY7 689 aaKnown RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 EBNA1BP2Q99848 306 aaKnown RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TRPC4Q9UBN4 977 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 RPS6KB2Q9UBS0 482 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 RAP2CQ9Y3L5 183 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PPLO60437 1756 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 KCNH1O95259 989 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PBLDP30039 288 aaPredicted RBP14.14□□□□□ -0.15
VTI1B-204ENST00000554659 TGFB2P61812 414 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 PRKCQQ04759 706 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 GRIK3Q13003 919 aa14.14□□□□□ -0.15
VTI1B-204ENST00000554659 GPSM1Q86YR5 675 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms