RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 C4orf47A7E2U8 309 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 CTNNA2P26232 953 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 GABRB2P47870 512 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 TPMTP51580 245 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 COPAP53621 1224 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 EIF4EBP2Q13542 120 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 PPP2R5EQ16537 467 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 PTPRNQ16849 979 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 DUOXA1Q1HG43 343 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 FSCBQ5H9T9 825 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 DAB2IPQ5VWQ8 1189 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 RNF219Q5W0B1 726 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 MMS22LQ6ZRQ5 1243 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 SLC41A1Q8IVJ1 513 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 MCOLN2Q8IZK6 566 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 OR2T3Q8NH03 318 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 CEP76Q8TAP6 659 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 CPA5Q8WXQ8 436 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 TTC17Q96AE7 1141 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 RPRD1AQ96P16 312 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 NAP1L3Q99457 506 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 GPR174Q9BXC1 333 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 VIPAS39Q9H9C1 493 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 FBRSQ9HAH7 460 aa12.77□□□□□ -0.37
SHMT2-214ENST00000554604 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 CNOT8Q9UFF9 292 aaKnown RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 EVLQ9UI08 416 aaPredicted RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 DMGDHQ9UI17 866 aaKnown RBP12.77□□□□□ -0.37
SHMT2-214ENST00000554604 CABIN1Q9Y6J0 2220 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 A0A1B0GVM2 712 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 TCAF2A6NFQ2 919 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 MEI4A8MW99 385 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 F9P00740 461 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 DNTTP04053 509 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 SCNN1AP37088 669 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 NSFP46459 744 aaKnown RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 SULT1E1P49888 294 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 ATXN3P54252 364 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 NOMO3P69849 1222 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 CBX1P83916 185 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 CASP8Q14790 479 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 C2CD6Q53TS8 623 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 PITRM1Q5JRX3 1037 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 WDR45BQ5MNZ6 344 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 NAA35Q5VZE5 725 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 MON1BQ7L1V2 547 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 CIR1Q86X95 450 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 XYLT1Q86Y38 959 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 PHF13Q86YI8 300 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 IFT20Q8IY31 132 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 EIF1ADQ8N9N8 165 aaKnown RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 AENQ8WTP8 325 aaKnown RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 ZNF419Q96HQ0 510 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 LMLNQ96KR4 655 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 KRT12Q99456 494 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 NPY6RQ99463 290 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 PRMT1Q99873 361 aaKnown RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 SIK2Q9H0K1 926 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 ACBD3Q9H3P7 528 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 WDCPQ9H6R7 721 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 PRSS16Q9NQE7 514 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 PIGVQ9NUD9 493 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 WSB2Q9NYS7 404 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 INTS6Q9UL03 887 aaKnown RBP12.76□□□□□ -0.37
SHMT2-214ENST00000554604 VANGL2Q9ULK5 521 aa12.76□□□□□ -0.37
SHMT2-214ENST00000554604 CCDC66A2RUB6 948 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 ACACBO00763 2458 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 RNASEH1O60930 286 aaKnown RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 PAGE1O75459 146 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 SRPRAP08240 638 aaKnown RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 SERPINF2P08697 491 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 GNSP15586 552 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 COMTP21964 271 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 CTNNA1P35221 906 aaKnown RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 NNMTP40261 264 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 MAPK8P45983 427 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 OXCT1P55809 520 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 ECT2LQ008S8 904 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 DEUP1Q05D60 604 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 C1QBPQ07021 282 aaKnown RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 GPS2Q13227 327 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 SLC12A1Q13621 1099 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 AUHQ13825 339 aaKnown RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 MESDQ14696 234 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 UAP1L1Q3KQV9 507 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 PLEKHG6Q3KR16 790 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 SLC25A52Q3SY17 297 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 TTC31Q49AM3 519 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 BRMS1LQ5PSV4 323 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 DCAF12L1Q5VU92 463 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 PEAR1Q5VY43 1037 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 ZNF776Q68DI1 518 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-214ENST00000554604 FBXL22Q6P050 247 aa12.75□□□□□ -0.37
SHMT2-214ENST00000554604 SLC23A3Q6PIS1 610 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms