RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 GALNTL6Q49A17 601 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 PRAMEF19Q5SWL8 479 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 GGT6Q6P531 493 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 KIAA1324Q6UXG2 1013 aaKnown RBP4.31□□□□□ -1.72
SCFD1-210ENST00000553693 Q6ZSV7 163 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 Q6ZTC4 211 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 PALB2Q86YC2 1186 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 CCDC117Q8IWD4 279 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-210ENST00000553693 ZDHHC23Q8IYP9 409 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 CLEC18CQ8NCF0 446 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 OR1N1Q8NGS0 311 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 SLC35F5Q8WV83 523 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 C3orf49Q96BT1 292 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 HDHD5Q9BXW7 423 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 SLC22A11Q9NSA0 550 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 TXLNGQ9NUQ3 528 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 IL36RNQ9UBH0 155 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 PCDHGB1Q9Y5G3 927 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 SRPRBQ9Y5M8 271 aaKnown RBP4.31□□□□□ -1.72
SCFD1-210ENST00000553693 CC2D2AQ9P2K1 1620 aa4.31□□□□□ -1.72
SCFD1-210ENST00000553693 NPIPB13A6NJU9 1138 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 NPIPB5A8MRT5 1133 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 NPIPB4C9JG80 1138 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 KIF1CO43896 1103 aaKnown RBP4.3□□□□□ -1.72
SCFD1-210ENST00000553693 MMP3P08254 477 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 SETSIPP0DME0 302 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 RFX5P48382 616 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-210ENST00000553693 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
SCFD1-210ENST00000553693 HYAL1Q12794 435 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 HLFQ16534 295 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 TDRD12Q587J7 1177 aaKnown RBP4.3□□□□□ -1.72
SCFD1-210ENST00000553693 TMEM71Q6P5X7 295 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 GALNT7Q86SF2 657 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 VPS52Q8N1B4 723 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 OR14A16Q8NHC5 309 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 SVIPQ8NHG7 77 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 TMEM163Q8TC26 289 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 HDAC7Q8WUI4 952 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 FAR1Q8WVX9 515 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 ADAMTS14Q8WXS8 1223 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 KCNJ9Q92806 393 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 ARRDC3Q96B67 414 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 APOLD1Q96LR9 279 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 CADM1Q9BY67 442 aaKnown RBP4.3□□□□□ -1.72
SCFD1-210ENST00000553693 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCFD1-210ENST00000553693 OSGIN2Q9Y236 505 aa4.3□□□□□ -1.72
SCFD1-210ENST00000553693 BTBD18B2RXH4 712 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 SYN3O14994 580 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 RNMTO43148 476 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 FCGR1AP12314 374 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 FCGR2AP12318 317 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 ENO3P13929 434 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 GNLYP22749 145 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 PDIA3P30101 505 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 SERPINF1P36955 418 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 PPP3CCP48454 512 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 CDH12P55289 794 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 SEC61A1P61619 476 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 ICA1Q05084 483 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 PUM3Q15397 648 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 AADACL2Q6P093 401 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 MTFR2Q6P444 385 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 CREB3L2Q70SY1 520 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 ZNF367Q7RTV3 350 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 RNF144BQ7Z419 303 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 SCN4BQ8IWT1 228 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 PTGR2Q8N8N7 351 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 FAM216AQ8WUB2 273 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 RMDN3Q96TC7 470 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 WDR12Q9GZL7 423 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 ZNF700Q9H0M5 742 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 PABPC3Q9H361 631 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 RMI1Q9H9A7 625 aa4.29□□□□□ -1.72
SCFD1-210ENST00000553693 SEPSECSQ9HD40 501 aaKnown RBP4.29□□□□□ -1.72
SCFD1-210ENST00000553693 DENND3A2RUS2 1198 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 ACKR2O00590 384 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 DDAH2O95865 285 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 CYP4B1P13584 511 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 AMTP48728 403 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 RPS6KA3P51812 740 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 NUDT6P53370 316 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 PMS2P54278 862 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 PNLIPRP1P54315 467 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 DCTN1Q14203 1278 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 C9orf50Q5SZB4 431 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 TMEM268Q5VZI3 342 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 NCAPH2Q6IBW4 605 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 TOGARAM2Q6ZUX3 1019 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 FJX1Q86VR8 437 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 ATG16L2Q8NAA4 619 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 SCAMP5Q8TAC9 235 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 CEP76Q8TAP6 659 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 C2CD4CQ8TF44 421 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 LMLNQ96KR4 655 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 TEFMQ96QE5 360 aaKnown RBP4.28□□□□□ -1.72
SCFD1-210ENST00000553693 GFM1Q96RP9 751 aaKnown RBP4.28□□□□□ -1.72
SCFD1-210ENST00000553693 CLPBQ9H078 707 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 DACT1Q9NYF0 836 aa4.28□□□□□ -1.72
SCFD1-210ENST00000553693 LRFN1Q9P244 771 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms