RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 DCAF4L2Q8NA75 395 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 C3orf20Q8ND61 904 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 OR8D1Q8WZ84 308 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 VOPP1Q96AW1 172 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 MYOCQ99972 504 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 TTYH3Q9C0H2 523 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 OR12D3Q9UGF7 316 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 ADAMTS1Q9UHI8 967 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 HS3ST2Q9Y278 367 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 ANKRD6Q9Y2G4 727 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 CACNA1EQ15878 2313 aa18.65■□□□□ 0.58
SHMT2-206ENST00000553529 A0A1W2PPC4 97 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 SIGLEC16A6NMB1 481 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 C1QTNF9BB2RNN3 333 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 ADH1BP00325 375 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 C1QTNF9P0C862 333 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 NNMTP40261 264 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 GSCP56915 257 aaPredicted RBP18.64■□□□□ 0.57
SHMT2-206ENST00000553529 GNA12Q03113 381 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 CA9Q16790 459 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 ACAD10Q6JQN1 1059 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 SCYL2Q6P3W7 929 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 KDM7AQ6ZMT4 941 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 DPY19L3Q6ZPD9 716 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 RABEPKQ7Z6M1 372 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 SETD3Q86TU7 594 aaPredicted RBP18.64■□□□□ 0.57
SHMT2-206ENST00000553529 MARCH9Q86YJ5 346 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 ARFGAP1Q8N6T3 406 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 NOL6Q9H6R4 1146 aaKnown RBP18.64■□□□□ 0.57
SHMT2-206ENST00000553529 ATP13A1Q9HD20 1204 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 TM7SF3Q9NS93 570 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 KLK13Q9UKR3 277 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 ANGPTL2Q9UKU9 493 aa18.64■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3DA0A087WVF3 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3IA0A087WXS9 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3EA0A087X179 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3KA0A087X1G2 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3FA6NER0 549 aaPredicted RBP18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3LB9A6J9 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 DDX3XO00571 662 aaKnown RBP eCLIP18.63■□□□□ 0.571e-14■■□□□ 13.5
SHMT2-206ENST00000553529 MCF2LO15068 1137 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 PLEKP08567 350 aaPredicted RBP18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3HP0C7X1 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 FERP16591 822 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 AFF3P51826 1226 aaKnown RBP18.63■□□□□ 0.57
SHMT2-206ENST00000553529 SHBQ15464 509 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 ASIC2Q16515 512 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 ARSIQ5FYB1 569 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 C6orf118Q5T5N4 469 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 PIP5KL1Q5T9C9 394 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3GQ6DHY5 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3CQ6IPX1 549 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 STRADAQ7RTN6 431 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 GATAD2AQ86YP4 633 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TBC1D3Q8IZP1 549 aaPredicted RBP18.63■□□□□ 0.57
SHMT2-206ENST00000553529 OR2T34Q8NGX1 318 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 FAM131CQ96AQ9 280 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 PEBP4Q96S96 227 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 TM6SF2Q9BZW4 377 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 NAT10Q9H0A0 1025 aaKnown RBP18.63■□□□□ 0.57
SHMT2-206ENST00000553529 FZD3Q9NPG1 666 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 ARHGAP20Q9P2F6 1191 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 FZD4Q9ULV1 537 aa18.63■□□□□ 0.57
SHMT2-206ENST00000553529 CHD5Q8TDI0 1954 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 ILVBLA1L0T0 632 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 KPNA3O00505 521 aaPredicted RBP18.62■□□□□ 0.57
SHMT2-206ENST00000553529 PLRG1O43660 514 aaKnown RBP18.62■□□□□ 0.57
SHMT2-206ENST00000553529 CBFA2T3O75081 653 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 CALB1P05937 261 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 PRLRP16471 622 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 TNFAIP3P21580 790 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 CHRNA3P32297 505 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 CTSKP43235 329 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 KRT83P78385 493 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
SHMT2-206ENST00000553529 NR1I3Q14994 352 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 CHCHD4Q8N4Q1 142 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 SETD7Q8WTS6 366 aaKnown RBP18.62■□□□□ 0.57
SHMT2-206ENST00000553529 C2orf49Q9BVC5 232 aaPredicted RBP18.62■□□□□ 0.57
SHMT2-206ENST00000553529 SCNM1Q9BWG6 230 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 PCED1AQ9H1Q7 454 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 AASDHPPTQ9NRN7 309 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 PPARGC1AQ9UBK2 798 aaKnown RBP18.62■□□□□ 0.57
SHMT2-206ENST00000553529 GGT7Q9UJ14 662 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 SCML1Q9UN30 329 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 DAAM1Q9Y4D1 1078 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 WASF2Q9Y6W5 498 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 FRYQ5TBA9 3013 aa18.62■□□□□ 0.57
SHMT2-206ENST00000553529 A0A1W2PR77 199 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 LRRC72A6NJI9 287 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 GOLGA8CPA6NN73 597 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 SMTNL1A8MU46 457 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 CREB3O43889 395 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 LEFTY1O75610 366 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 KRT37O76014 449 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 TCF4P15884 667 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 GRIA4P48058 902 aa18.61■□□□□ 0.57
SHMT2-206ENST00000553529 SERPINH1P50454 418 aaKnown RBP18.61■□□□□ 0.57
SHMT2-206ENST00000553529 VASPP50552 380 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms