RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 RAB27AP51159 221 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 AQP4P55087 323 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 NOTUMQ6P988 496 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 VSTM1Q6UX27 236 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 PACS1Q6VY07 963 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 METTL6Q8TCB7 284 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SPPL2AQ8TCT8 520 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 CIB1Q99828 191 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 NFAT5O94916 1531 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 CYP3A4P08684 503 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SCNN1BP51168 640 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 GTF2BQ00403 316 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 C12orf50Q8NA57 414 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SPRTNQ9H040 489 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 HDHD2Q9H0R4 259 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 NOL11Q9H8H0 719 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SIN3BO75182 1162 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 RECQL5O94762 991 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 IFNA14P01570 189 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SLURP2P0DP57 97 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 CCT3P49368 545 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SPESP1Q6UW49 350 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 ILDR2Q71H61 639 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 C11orf74Q86VG3 221 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 DNAJB14Q8TBM8 379 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 RNFT2Q96EX2 444 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 POLIQ9UNA4 740 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 TMX2Q9Y320 296 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 ROBO3Q96MS0 1386 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 A0A087X1B8 175 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 E5RJQ4 531 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SLC2A3P11169 496 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 CLCN3P51790 818 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SLC7A2P52569 658 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SAPCD2Q86UD0 394 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 SAMD3Q8N6K7 520 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 OR52K1Q8NGK4 314 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 FGFBP2Q9BYJ0 223 aa16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 NKX1-2Q9UD57 310 aaPredicted RBP16.03■□□□□ 0.16
RBFOX1-212ENST00000550418 TRAFD1O14545 582 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 DBTP11182 482 aaKnown RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 SLC6A3Q01959 620 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 MAD2L1Q13257 205 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ECM1Q16610 540 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 DGKKQ5KSL6 1271 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 UTS2BQ765I0 119 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 NECAB2Q7Z6G3 386 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 AKAP14Q86UN6 197 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 IL22Q9GZX6 179 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 MUC3BQ9H195 1237 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ZDHHC18Q9NUE0 388 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 LNPEPQ9UIQ6 1025 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 RIC1Q4ADV7 1423 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 CYP3A7-CYP3A51PA0A087WV96 503 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 FBXO21O94952 628 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 CYP3A7P24462 503 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 CRHR1P34998 444 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 FASTKD3Q14CZ7 662 aaKnown RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 C15orf59Q2T9L4 293 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ARSHQ5FYA8 562 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 LIPMQ5VYY2 423 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ZNF57Q68EA5 555 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ZDHHC24Q6UX98 284 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ZNF605Q86T29 641 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 OR56A4Q8NGH8 313 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 ZBTB45Q96K62 511 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 DNAJC1Q96KC8 554 aaKnown RBP16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 TBCDQ9BTW9 1192 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 NUDT5Q9UKK9 219 aa16.02■□□□□ 0.16
RBFOX1-212ENST00000550418 PSMB4P28070 264 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 CCNG1P51959 295 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 TEKT5Q96M29 485 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 TUBGCP5Q96RT8 1024 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 VAT1Q99536 393 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ELOVL6Q9H5J4 265 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ACTR8Q9H981 624 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ELP3Q9H9T3 547 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 NT5MQ9NPB1 228 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 KCNH4Q9UQ05 1017 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 TIPRLO75663 272 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ZNF12P17014 697 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 CCR1P32246 355 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 WDR4P57081 412 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ZPBP2Q6X784 338 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ANKS3Q6ZW76 656 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 PSTKQ8IV42 348 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 HERC6Q8IVU3 1022 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 C10orf82Q8WW14 230 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 ITFG2Q969R8 447 aa16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 RPRD1AQ96P16 312 aaPredicted RBP16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 TSEN34Q9BSV6 310 aaKnown RBP16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 CINPQ9BW66 212 aaPredicted RBP16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 WDR55Q9H6Y2 383 aaPredicted RBP16.02■□□□□ 0.15
RBFOX1-212ENST00000550418 RBMX2Q9Y388 322 aaKnown RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms