RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 CEP57L1Q8IYX8 460 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 KCTD13Q8WZ19 329 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 AZIN2Q96A70 460 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 FAM131CQ96AQ9 280 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 KLHDC7BQ96G42 594 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 FCRL2Q96LA5 508 aaPredicted RBP10.82□□□□□ -0.68
VPS29-208ENST00000550267 APOLD1Q96LR9 279 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 ZNF396Q96N95 335 aaPredicted RBP10.82□□□□□ -0.68
VPS29-208ENST00000550267 DDX50Q9BQ39 737 aaKnown RBP10.82□□□□□ -0.68
VPS29-208ENST00000550267 TRIM4Q9C037 500 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 CNGB3Q9NQW8 809 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 THSD1Q9NS62 852 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 RAB20Q9NX57 234 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 FAM13BQ9NYF5 915 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 SARDHQ9UL12 918 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 MGAQ8IWI9 3026 aa10.82□□□□□ -0.68
VPS29-208ENST00000550267 KNL1Q8NG31 2342 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 MYO18BQ8IUG5 2567 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 NYNRINQ9P2P1 1898 aaKnown RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 A0A1W2PNU3 283 aaPredicted RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 K7ENP7 123 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 MOCS2O96007 188 aaPredicted RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 THEGLP0DJG4 465 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 CD19P15391 556 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 PSMC2P35998 433 aaKnown RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 NUDT1P36639 197 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 CSRP3P50461 194 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 CNTN1Q12860 1018 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 SETMARQ53H47 684 aaPredicted RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 C3orf38Q5JPI3 329 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 AGBL4Q5VU57 503 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 RESP18Q5W5W9 173 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 INO80CQ6PI98 192 aaPredicted RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 TRIM69Q86WT6 500 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 SCML4Q8N228 414 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 CLEC4CQ8WTT0 213 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 KLK6Q92876 244 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 EEF2KMTQ96G04 330 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 PAGE5Q96GU1 130 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 FAXDC2Q96IV6 333 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 SPAG5Q96R06 1193 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 ABCG4Q9H172 646 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 UPF2Q9HAU5 1272 aaKnown RBP10.81□□□□□ -0.68
VPS29-208ENST00000550267 KLHL11Q9NVR0 708 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 SATB2Q9UPW6 733 aa10.81□□□□□ -0.68
VPS29-208ENST00000550267 LY6G6EA0A0G2JKS1 128 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 O00370 1275 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 SLC31A1O15431 190 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 SLC7A4O43246 635 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 OIP5O43482 229 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 RNGTTO60942 597 aaKnown RBP10.8□□□□□ -0.68
VPS29-208ENST00000550267 PIAS2O75928 621 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 LTFP02788 710 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 GP1BAP07359 652 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 SETSIPP0DME0 302 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 ALPPL2P10696 532 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 PRLRP16471 622 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 RBMS1P29558 406 aaKnown RBP10.8□□□□□ -0.68
VPS29-208ENST00000550267 GTF2H1P32780 548 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 NNMTP40261 264 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 MXI1P50539 228 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 ENPEPQ07075 957 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 SRSF1Q07955 248 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS29-208ENST00000550267 NFATC3Q12968 1075 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 NFIL3Q16649 462 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 ISXQ2M1V0 245 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 FOXD4L6Q3SYB3 417 aaPredicted RBP10.8□□□□□ -0.68
VPS29-208ENST00000550267 FOXD4L3Q6VB84 417 aaPredicted RBP10.8□□□□□ -0.68
VPS29-208ENST00000550267 CCDC81Q6ZN84 652 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 LGI2Q8N0V4 545 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 TMEM145Q8NBT3 493 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 FBXL13Q8NEE6 735 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 OR13H1Q8NG92 308 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 IFI44Q8TCB0 444 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 MAPK15Q8TD08 544 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 FRS2Q8WU20 508 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 IRGQQ8WZA9 623 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 CALN1Q9BXU9 219 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 FZD3Q9NPG1 666 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 TIMMDC1Q9NPL8 285 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 XPO7Q9UIA9 1087 aaKnown RBP10.8□□□□□ -0.68
VPS29-208ENST00000550267 PCDHA7Q9UN72 937 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 MAPK8IP1Q9UQF2 711 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 U3KQA8 63 aa10.8□□□□□ -0.68
VPS29-208ENST00000550267 PMS2P1A4D2B8 440 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 NEBLO76041 1014 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 FYNP06241 537 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 CENPBP07199 599 aaPredicted RBP10.79□□□□□ -0.68
VPS29-208ENST00000550267 VDRP11473 427 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 PDGFRAP16234 1089 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 TACR2P21452 398 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 TGM2P21980 687 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 MAP2K3P46734 347 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 ME1P48163 572 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 DUSP3P51452 185 aaPredicted RBP10.79□□□□□ -0.68
VPS29-208ENST00000550267 TAS2R38P59533 333 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 ADAM9Q13443 819 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 CUL2Q13617 745 aa10.79□□□□□ -0.68
VPS29-208ENST00000550267 ZNF542PQ5EBM4 170 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms