RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 BTBD9Q96Q07 612 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 TRIM62Q9BVG3 475 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 ULBP1Q9BZM6 244 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 KLHL25Q9H0H3 589 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 SPAG4Q9NPE6 437 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 SETD4Q9NVD3 440 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 RIC8BQ9NVN3 520 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 DNAJC28Q9NX36 388 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 MFSD11O43934 449 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 CABYRO75952 493 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 PARNO95453 639 aaKnown RBP10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 CCDC166P0CW27 439 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 HSDL1Q3SXM5 330 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 ZIK1Q3SY52 487 aaPredicted RBP10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 GPR107Q5VW38 600 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 FRMD7Q6ZUT3 714 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 PHTF2Q8N3S3 785 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 NIPA2Q8N8Q9 360 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 WNT8BQ93098 351 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 POPDC2Q9HBU9 364 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 ATP11BQ9Y2G3 1177 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 CRYL1Q9Y2S2 319 aa10.38□□□□□ -0.75
SMARCC2-209ENST00000550164 A6NHS1 94 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PTGES3LE9PB15 166 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PYGLP06737 847 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 RXRBP28702 533 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 CCR1P32246 355 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 SLC25A11Q02978 314 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 LSM12Q3MHD2 195 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 GJC2Q5T442 439 aaPredicted RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 TMEM198Q66K66 360 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 SCARA3Q6AZY7 606 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 MRNIPQ6NTE8 343 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 LCLAT1Q6UWP7 414 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 DACT3Q96B18 629 aaPredicted RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PHF12Q96QT6 1004 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 MRPL45Q9BRJ2 306 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 C9orf16Q9BUW7 83 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 ALG9Q9H6U8 611 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 CHRAC1Q9NRG0 131 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 STK39Q9UEW8 545 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PDE4DIPQ5VU43 2346 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 TSPAN3O60637 253 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 DAB1O75553 588 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 B3GAT3O94766 335 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 NOS2P35228 1153 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 INSCQ1MX18 579 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PIWIL4Q7Z3Z4 852 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 SLC22A9Q8IVM8 553 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PTCD3Q96EY7 689 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 OSBPL11Q9BXB4 747 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 TKTL2Q9H0I9 626 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 PNPLA3Q9NST1 481 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 DDX43Q9NXZ2 648 aaKnown RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 KANSL1LA0AUZ9 987 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 KCNU1A8MYU2 1149 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 GPR25O00155 361 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 GRIN3BO60391 1043 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 FKBP9O95302 570 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 FCGR1AP12314 374 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 ATP5F1P24539 256 aaPredicted RBP10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 SERPINB1P30740 379 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 CDH13P55290 713 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 ITGADQ13349 1161 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 SLC9B1Q4ZJI4 515 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 ATP6AP1LQ52LC2 224 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 METTL21CQ5VZV1 264 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 FKBP9P1Q75LS8 142 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 TFAP2DQ7Z6R9 452 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 HERC6Q8IVU3 1022 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 SNX31Q8N9S9 440 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 DNAJB14Q8TBM8 379 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 GIPC3Q8TF64 312 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 NSMCE2Q96MF7 247 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 TWNKQ96RR1 684 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 OR12D3Q9UGF7 316 aa10.37□□□□□ -0.75
SMARCC2-209ENST00000550164 KLF11O14901 512 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 SOAT2O75908 522 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 RECQL4O94761 1208 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 CHRNGP07510 517 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 CSE1LP55060 971 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 KCNJ11Q14654 390 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 MAPK11Q15759 364 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 TAF2Q6P1X5 1199 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 UBR7Q8N806 425 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 GLMNQ92990 594 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 AGAP2Q99490 1192 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 DGCR6LQ9BY27 220 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 LATS2Q9NRM7 1088 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 FAM8A1Q9UBU6 413 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 DNAJB4Q9UDY4 337 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 DAPK2Q9UIK4 370 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 NUDT5Q9UKK9 219 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 FARP1Q9Y4F1 1045 aaPredicted RBP10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 PCDHB12Q9Y5F1 795 aa10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 RNASEH1O60930 286 aaKnown RBP10.36□□□□□ -0.75
SMARCC2-209ENST00000550164 FARP2O94887 1054 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms