RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CISD3P0C7P0 127 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 GLULP15104 373 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 IL9P15248 144 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 VAV1P15498 845 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 POLR2EP19388 210 aaKnown RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 PTPN3P26045 913 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 HSPA9P38646 679 aaKnown RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 EIF4HQ15056 248 aaKnown RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 INO80DQ53TQ3 878 aaPredicted RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 ARHGAP36Q6ZRI8 547 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 ARHGEF18Q6ZSZ5 1173 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 BBOF1Q8ND07 529 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 LRRN4CLQ8ND94 238 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 LRRC45Q96CN5 670 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 MSANTD3Q96H12 275 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 IL12RB2Q99665 862 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 ERP44Q9BS26 406 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 C8orf33Q9H7E9 229 aaPredicted RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 PDFQ9HBH1 243 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 KLHL8Q9P2G9 620 aaPredicted RBP16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 ASIC3Q9UHC3 531 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 VPS51Q9UID3 782 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 SLC25A13Q9UJS0 675 aa16.15■□□□□ 0.18
TRAFD1-203ENST00000547063 OTOL1A6NHN0 477 aaPredicted RBP16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 J3KR12 359 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 HEXIM1O94992 359 aaKnown RBP16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 JCHAINP01591 159 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 TUBBP07437 444 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 MCM3P25205 808 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 ADCY8P40145 1251 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 MMP13P45452 471 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 DRG2P55039 364 aaKnown RBP16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 GDF10P55107 478 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 WASHC5Q12768 1159 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 TDGQ13569 410 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 ZNF235Q14590 738 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 LBRQ14739 615 aaKnown RBP16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 GAB4Q2WGN9 574 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 ANKRD20A2Q5SQ80 823 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 ANKRD20A1Q5TYW2 823 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 ANKRD20A3Q5VUR7 823 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 B4GALNT4Q76KP1 1039 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 PID1Q7Z2X4 250 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 APCDD1Q8J025 514 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 UCMAQ8WVF2 138 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 TTC17Q96AE7 1141 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 TEKT5Q96M29 485 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 PNKPQ96T60 521 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 C10orf88Q9H8K7 445 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 RBM22Q9NW64 420 aaKnown RBP eCLIP16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 SEPT3Q9UH03 358 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 NEU2Q9Y3R4 380 aa16.14■□□□□ 0.17
TRAFD1-203ENST00000547063 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 GOLGA6CA6NDK9 693 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 GOLGA6BA6NDN3 693 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 ZMPSTE24O75844 475 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 RHOXF2BP0C7M4 288 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 GOLGA6DP0CG33 693 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 SRFP11831 508 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 CES1P23141 567 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 FDFT1P37268 417 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 NNMTP40261 264 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 VASPP50552 380 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 ECT2LQ008S8 904 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 FUT11Q495W5 492 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 MBLAC2Q68D91 279 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 ASTLQ6HA08 431 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 PCGF5Q86SE9 256 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 C12orf40Q86WS4 652 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 RALGPS2Q86X27 583 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 IFT20Q8IY31 132 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 TEX26Q8N6G2 289 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 MYRIPQ8NFW9 859 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 ATXN2LQ8WWM7 1075 aaKnown RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 RHOXF2Q9BQY4 288 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 CINPQ9BW66 212 aaPredicted RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 FAM129AQ9BZQ8 928 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 SLC2A4RGQ9NR83 387 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 GOLGA6AQ9NYA3 693 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 INTS6Q9UL03 887 aaKnown RBP16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 SLC8A2Q9UPR5 921 aa16.13■□□□□ 0.17
TRAFD1-203ENST00000547063 KIAA1549LQ6ZVL6 1849 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 TICRRQ7Z2Z1 1910 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 SMAPO00193 183 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 SNAP91O60641 907 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 PEX11BO96011 259 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 APODP05090 189 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 SRPRAP08240 638 aaKnown RBP16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 RPL22P35268 128 aaKnown RBP16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 OPRD1P41143 372 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 GRIA2P42262 883 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 SERPINH1P50454 418 aaKnown RBP16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 ARF5P84085 180 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 GUCY2DQ02846 1103 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 GPS1Q13098 491 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 ZBTB17Q13105 803 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 CALCOCO2Q13137 446 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 PRPSAP1Q14558 356 aa16.12■□□□□ 0.17
TRAFD1-203ENST00000547063 TRIP13Q15645 432 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms