RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ARHGAP42A6NI28 874 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 K7ERQ8 282 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 FTCDO95954 541 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 SERPINB6P35237 376 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 CDKN2BP42772 138 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 SERPINH1P50454 418 aaKnown RBP20.91■□□□□ 0.94
HMGA2-211ENST00000545998 PEX5P50542 639 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 PAFAH1B3Q15102 231 aaKnown RBP20.91■□□□□ 0.94
HMGA2-211ENST00000545998 DLG2Q15700 870 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 MFSD7Q6UXD7 560 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 RASSF3Q86WH2 238 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 ZNF354CQ86Y25 554 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 EXD1Q8NHP7 514 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 FAM126AQ9BYI3 521 aaPredicted RBP20.91■□□□□ 0.94
HMGA2-211ENST00000545998 PRSS16Q9NQE7 514 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 ACTL7AQ9Y615 435 aa20.91■□□□□ 0.94
HMGA2-211ENST00000545998 SHROOM3Q8TF72 1996 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 EDDM13A0A1B0GTR0 161 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 TARSL2A2RTX5 802 aaKnown RBP20.9■□□□□ 0.94
HMGA2-211ENST00000545998 ZSCAN5CA6NGD5 496 aaPredicted RBP20.9■□□□□ 0.94
HMGA2-211ENST00000545998 DFFAO00273 331 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 SMAD6O43541 496 aaKnown RBP20.9■□□□□ 0.94
HMGA2-211ENST00000545998 ALDH1A2O94788 518 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 ZRANB2O95218 330 aaKnown RBP eCLIP20.9■□□□□ 0.94
HMGA2-211ENST00000545998 GABRG2P18507 467 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 PXNP49023 591 aaPredicted RBP20.9■□□□□ 0.94
HMGA2-211ENST00000545998 CLCN6P51797 869 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 NRLP54845 237 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 C9orf64Q5T6V5 341 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 ANO7Q6IWH7 933 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 RCOR2Q8IZ40 523 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 MDGA1Q8NFP4 955 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 PTPRN2Q92932 1015 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 FRYLO94915 3013 aa20.9■□□□□ 0.94
HMGA2-211ENST00000545998 H0Y858 1186 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 MFSD11O43934 449 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 SIN3BO75182 1162 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 VAV1P15498 845 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 COPAP53621 1224 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 GEMIN4P57678 1058 aaKnown RBP20.89■□□□□ 0.94
HMGA2-211ENST00000545998 SLC9A4Q6AI14 798 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 LEKR1Q6ZMV7 388 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 SPOCD1Q6ZMY3 1216 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 HMGB4Q8WW32 186 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 ALG3Q92685 438 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 RBM41Q96IZ5 413 aaKnown RBP20.89■□□□□ 0.94
HMGA2-211ENST00000545998 MKRN2Q9H000 416 aaKnown RBP20.89■□□□□ 0.94
HMGA2-211ENST00000545998 PRDM16Q9HAZ2 1276 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 PDFQ9HBH1 243 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 PACSIN2Q9UNF0 486 aaPredicted RBP20.89■□□□□ 0.94
HMGA2-211ENST00000545998 HCN4Q9Y3Q4 1203 aa20.89■□□□□ 0.94
HMGA2-211ENST00000545998 CCDC163A0A0D9SF12 145 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 MIF4GDA9UHW6 222 aaKnown RBP20.89■□□□□ 0.93
HMGA2-211ENST00000545998 J3KR12 359 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 PRAMEF11O60813 436 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 C7P10643 843 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 NDUFV2P19404 249 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 FNTBP49356 437 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 RWDD2BP57060 319 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 ACCSLQ4AC99 568 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 HEATR6Q6AI08 1181 aaKnown RBP20.89■□□□□ 0.93
HMGA2-211ENST00000545998 ARHGAP36Q6ZRI8 547 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 REXO1L1PQ8IX06 675 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 PLD5Q8N7P1 536 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 OR2T3Q8NH03 318 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 HES6Q96HZ4 224 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 MAK16Q9BXY0 300 aaKnown RBP20.89■□□□□ 0.93
HMGA2-211ENST00000545998 CEP44Q9C0F1 390 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 FBRSQ9HAH7 460 aa20.89■□□□□ 0.93
HMGA2-211ENST00000545998 DDX3YO15523 660 aaKnown RBP20.88■□□□□ 0.93
HMGA2-211ENST00000545998 ZSCAN12O43309 604 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 ZNF821O75541 412 aaPredicted RBP20.88■□□□□ 0.93
HMGA2-211ENST00000545998 TFDP3Q5H9I0 405 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 C22orf39Q6P5X5 142 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 Q6ZVU0 165 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 WDR5BQ86VZ2 330 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 LONP2Q86WA8 852 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 RFX6Q8HWS3 928 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 MRGPRX1Q96LB2 322 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 SLC6A17Q9H1V8 727 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 ZSCAN32Q9NX65 697 aa20.88■□□□□ 0.93
HMGA2-211ENST00000545998 BCCIPQ9P287 314 aaKnown RBP eCLIP20.88■□□□□ 0.93
HMGA2-211ENST00000545998 IPO11Q9UI26 975 aaKnown RBP20.88■□□□□ 0.93
HMGA2-211ENST00000545998 FCF1Q9Y324 198 aaKnown RBP20.88■□□□□ 0.93
HMGA2-211ENST00000545998 hCG_1818297A0A087WSY0 165 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 ZFXP17010 805 aaPredicted RBP20.87■□□□□ 0.93
HMGA2-211ENST00000545998 PTPN5P54829 565 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 COPS2P61201 443 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 GBE1Q04446 702 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 INO80DQ53TQ3 878 aaPredicted RBP20.87■□□□□ 0.93
HMGA2-211ENST00000545998 TMPRSS6Q8IU80 811 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 UBL4BQ8N7F7 174 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 ZBTB44Q8NCP5 570 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.87■□□□□ 0.93
HMGA2-211ENST00000545998 UBE2Q2Q8WVN8 375 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 CASKIN2Q8WXE0 1202 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 ISG20Q96AZ6 181 aaKnown RBP20.87■□□□□ 0.93
HMGA2-211ENST00000545998 ALS2CR12Q96Q35 445 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 FAM129BQ96TA1 746 aa20.87■□□□□ 0.93
HMGA2-211ENST00000545998 RSPH9Q9H1X1 276 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms