RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 C4orf22Q6V702 233 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 MAATS1Q7Z4T9 603 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 CDKL3Q8IVW4 592 aaPredicted RBP9.93□□□□□ -0.82
DDB1-225ENST00000545930 CCDC105Q8IYK2 499 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 BBS5Q8N3I7 341 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 CCNYQ8ND76 341 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 SPATA4Q8NEY3 305 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 RIN3Q8TB24 985 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 ACTL9Q8TC94 416 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 TFB1MQ8WVM0 346 aaKnown RBP9.93□□□□□ -0.82
DDB1-225ENST00000545930 FATE1Q969F0 183 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 HDAC11Q96DB2 347 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 PRICKLE1Q96MT3 831 aaPredicted RBP9.93□□□□□ -0.82
DDB1-225ENST00000545930 TSGA13Q96PP4 275 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 VAT1Q99536 393 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 C2orf49Q9BVC5 232 aaPredicted RBP9.93□□□□□ -0.82
DDB1-225ENST00000545930 MUC3BQ9H195 1237 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 EBF3Q9H4W6 596 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 L2HGDHQ9H9P8 463 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 ETNK2Q9NVF9 386 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 PLK2Q9NYY3 685 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 DTLQ9NZJ0 730 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 DEC1Q9P2X7 70 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 NEU3Q9UQ49 428 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 ZNF148Q9UQR1 794 aa9.93□□□□□ -0.82
DDB1-225ENST00000545930 REV3LO60673 3130 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 BCLAF3A2AJT9 711 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 DFFAO00273 331 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 NDC80O14777 642 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 SCAMP3O14828 347 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 KDELR3O43731 214 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 PHF2O75151 1096 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ASLP04424 464 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 CYP17A1P05093 508 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ATP5BP06576 529 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 IL9P15248 144 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ARSAP15289 507 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 NNMTP40261 264 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 GARSP41250 739 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 DGKGP49619 791 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 TFF2Q03403 129 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ADCY2Q08462 1091 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 GALNT2Q10471 571 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 SERINC3Q13530 473 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 RFTN1Q14699 578 aaPredicted RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 RNF219Q5W0B1 726 aaPredicted RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 AFMIDQ63HM1 303 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 HEATR6Q6AI08 1181 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 TRIM68Q6AZZ1 485 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 IL31Q6EBC2 164 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 RETSATQ6NUM9 610 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 CCDC137Q6PK04 289 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 SYDE1Q6ZW31 735 aaPredicted RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 ANKS1BQ7Z6G8 1248 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ADAT2Q7Z6V5 191 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 AHI1Q8N157 1196 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ATPAF2Q8N5M1 289 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 C12orf50Q8NA57 414 aaPredicted RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 CCHCR1Q8TD31 782 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 UCMAQ8WVF2 138 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 CASKIN2Q8WXE0 1202 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 RSAD2Q8WXG1 361 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ARHGEF2Q92974 986 aaKnown RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 NKD2Q969F2 451 aaPredicted RBP9.92□□□□□ -0.82
DDB1-225ENST00000545930 ZNF599Q96NL3 588 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 CNTNAP3BQ96NU0 1288 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 FEM1AQ9BSK4 669 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 AP1M1Q9BXS5 423 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 CNTNAP3Q9BZ76 1288 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 SLC39A8Q9C0K1 460 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 KDM4CQ9H3R0 1056 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ATP13A1Q9HD20 1204 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 ZNF212Q9UDV6 495 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 AMACRQ9UHK6 382 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 SLC8A2Q9UPR5 921 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 SLC27A6Q9Y2P4 619 aa9.92□□□□□ -0.82
DDB1-225ENST00000545930 MATN3O15232 486 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 LIASO43766 372 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 MFSD11O43934 449 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 GAS8O95995 478 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 APODP05090 189 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 ITGAVP06756 1048 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 SRFP11831 508 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 PABPC1P11940 636 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 POLR2EP19388 210 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 GJA4P35212 333 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 COILP38432 576 aaPredicted RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 PAPOLAP51003 745 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 RENBPP51606 427 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 SGSHP51688 502 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 GBE1Q04446 702 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 IL10RBQ08334 325 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 PPIDQ08752 370 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 AP1B1Q10567 949 aa9.91□□□□□ -0.82
DDB1-225ENST00000545930 SLC10A2Q12908 348 aaPredicted RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 HNRNPDQ14103 355 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 DHX34Q14147 1143 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 EIF4HQ15056 248 aaKnown RBP9.91□□□□□ -0.82
DDB1-225ENST00000545930 SIX1Q15475 284 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms