RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TIFAQ96CG3 184 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ACOX2Q99424 681 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PDZD7Q9H5P4 517 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PIH1D1Q9NWS0 290 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 A0A088AWK7 358 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 TSPAN9O75954 239 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PYGMP11217 842 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PGAM1P18669 254 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF10P21506 573 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 CHI3L1P36222 383 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 PFKPQ01813 784 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 RRP1BQ14684 758 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 KBTBD12Q3ZCT8 623 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM180BQ6P0A1 224 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 REXO1L1PQ8IX06 675 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 C12orf56Q8IXR9 622 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CAMKK1Q8N5S9 505 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 RADILQ96JH8 1075 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 MFSD14AQ96MC6 490 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ASB8Q9H765 288 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ZNF304Q9HCX3 659 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 SOHLH2Q9NX45 425 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PAIP2BQ9ULR5 123 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 INSL6Q9Y581 213 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 LOC100653049A0A140TA62 436 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 KLRG2A4D1S0 409 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM86C2PA6NEL3 165 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 KRT34O76011 436 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 GLI1P08151 1106 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PTPN2P17706 415 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 EEF1DP29692 281 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 PTGS2P35354 604 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ELK3P41970 407 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CD86P42081 329 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 STX5Q13190 355 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 MAMLD1Q13495 774 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CYP2A13Q16696 494 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PARP6Q2NL67 630 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 GRAMD4Q6IC98 578 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 FAM124AQ86V42 546 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 KATNAL2Q8IYT4 538 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 SNRNP27Q8WVK2 155 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 ZIM3Q96PE6 472 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 SEMA3CQ99985 751 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CDC42EP4Q9H3Q1 356 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 PLK2Q9NYY3 685 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 H2AFY2Q9P0M6 372 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 MAP10Q9P2G4 905 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 DKK3Q9UBP4 350 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 DNPEPQ9ULA0 475 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 USP15Q9Y4E8 981 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 MYO9BQ13459 2157 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3DA0A087WVF3 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3IA0A087WXS9 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3EA0A087X179 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3KA0A087X1G2 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3FA6NER0 549 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 ARL5CA6NH57 179 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TMEM114B3SHH9 223 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3LB9A6J9 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 GOLGA8TH3BQL2 631 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 KLRC4O43908 158 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 DAB1O75553 588 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3HP0C7X1 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ATP4AP20648 1035 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CYP3A5P20815 502 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 KELP23276 732 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 HSD17B3P37058 310 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PRKCIP41743 596 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ALDH9A1P49189 494 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CLCNKBP51801 687 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 C21orf59P57076 290 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PEX6Q13608 980 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 NR6A1Q15406 480 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 RAB30Q15771 203 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 MPPE1Q53F39 396 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 SPANXN3Q5MJ09 141 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3GQ6DHY5 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3CQ6IPX1 549 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 RASAL3Q86YV0 1011 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 TBC1D3Q8IZP1 549 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 FBXO39Q8N4B4 442 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 STX19Q8N4C7 294 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 CASKIN2Q8WXE0 1202 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 MCRS1Q96EZ8 462 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 FCRL2Q96LA5 508 aaPredicted RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 MYOCQ99972 504 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 EIF2AQ9BY44 585 aaKnown RBP7□□□□□ -1.29
SRGAP1-206ENST00000543397 ABCG4Q9H172 646 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 PARVBQ9HBI1 364 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 ARHGAP28Q9P2N2 729 aa7□□□□□ -1.29
SRGAP1-206ENST00000543397 IGKV6D-41A0A0C4DH26 115 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 WDR27A2RRH5 827 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 TGFB1I1O43294 461 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CALCAP01258 141 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 C8AP07357 584 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 THEGLP0DJG4 465 aa6.99□□□□□ -1.29
SRGAP1-206ENST00000543397 CCNB1P14635 433 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms