RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAM192AQ9GZU8 254 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SAP130Q9H0E3 1048 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 BRD8Q9H0E9 1235 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CDH19Q9H159 772 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SNX25Q9H3E2 840 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 NXF3Q9H4D5 531 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TMPRSS4Q9NRS4 437 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 SNX15Q9NRS6 342 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 PDP2Q9P2J9 529 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CDV3Q9UKY7 258 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TBC1D30Q9Y2I9 924 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 HES2Q9Y543 173 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CDY2AQ9Y6F7 541 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 CDY1Q9Y6F8 540 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 RPS6KL1Q9Y6S9 549 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 FNDC1Q4ZHG4 1894 aaPredicted RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 TRPM7Q96QT4 1865 aa5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF638Q14966 1978 aaKnown RBP5.3□□□□□ -1.56
ATPAF1-212ENST00000542495 NRCAMQ92823 1304 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MAGEB16A2A368 324 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 F5H423 210 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM72CH0Y354 149 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 I6L893 689 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 M0QYT0 321 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 EEF2KO00418 725 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GABRDO14764 452 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MTSS1O43312 755 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZBTB14O43829 449 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PEX1O43933 1283 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CACNG3O60359 315 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 BEST1O76090 585 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 LYNP07948 512 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HSPA8P11142 646 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CYP2C9P11712 490 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ERCC2P18074 760 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CYP2B6P20813 491 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ACAT1P24752 427 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 DNAJB1P25685 340 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 LRPAP1P30533 357 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CD68P34810 354 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NPY2RP49146 381 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HK2P52789 917 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CSE1LP55060 971 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MTTPP55157 894 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RAB15P59190 212 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 LILRA4P59901 499 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ADAM17P78536 824 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SOX4Q06945 474 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GALNT2Q10471 571 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 IFRD2Q12894 506 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 KLF10Q13118 480 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ITGA9Q13797 1035 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 DSC3Q14574 896 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 DGKDQ16760 1214 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 C11orf91Q3C1V1 193 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SV2CQ496J9 727 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ANKRD20A4Q4UJ75 823 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 DCAF6Q58WW2 860 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FSCBQ5H9T9 825 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RALGPS1Q5JS13 557 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM72AQ5TYM5 149 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SYPL2Q5VXT5 272 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NAIF1Q69YI7 327 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM72DQ6L9T8 149 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FSTL4Q6MZW2 842 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CES3Q6UWW8 571 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NAPRTQ6XQN6 538 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CLEC20AQ6ZU45 233 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HFE2Q6ZVN8 426 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RAPH1Q70E73 1250 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PID1Q7Z2X4 250 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CMC1Q7Z7K0 106 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 KBTBD6Q86V97 674 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 LCA5Q86VQ0 697 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 FAM72BQ86X60 149 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TP53INP2Q8IXH6 220 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 NME8Q8N427 588 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 TMEM151AQ8N4L1 468 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 OR52K1Q8NGK4 314 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZSCAN18Q8TBC5 510 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 AZIN2Q96A70 460 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF775Q96BV0 537 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 HDAC11Q96DB2 347 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PGAP3Q96FM1 320 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CNDP1Q96KN2 507 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CAPNS2Q96L46 248 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 LBHD1Q9BQE6 289 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 RTKNQ9BST9 563 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 MLPHQ9BV36 600 aaPredicted RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 CEP41Q9BYV8 373 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 GBA3Q9H227 469 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ZNF385DQ9H6B1 395 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 WDR6Q9NNW5 1121 aaKnown RBP5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 ANLNQ9NQW6 1124 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PIGVQ9NUD9 493 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 SETD4Q9NVD3 440 aa5.29□□□□□ -1.56
ATPAF1-212ENST00000542495 PIH1D1Q9NWS0 290 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms