RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 SLC25A41Q8N5S1 370 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 ENDOVQ8N8Q3 282 aaKnown RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 ZNF527Q8NB42 609 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 C7orf57Q8NEG2 295 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 ENGASEQ8NFI3 743 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 ERP27Q96DN0 273 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 CTAGE1Q96RT6 745 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 WDR77Q9BQA1 342 aaPredicted RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 CENPOQ9BU64 300 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 TMEM120AQ9BXJ8 343 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 ISCUQ9H1K1 167 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 RSPH9Q9H1X1 276 aaPredicted RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 PABPC3Q9H361 631 aaKnown RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 ABHD16BQ9H3Z7 469 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 PLK2Q9NYY3 685 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 TBC1D14Q9P2M4 693 aa3.91□□□□□ -1.78
LEMD3-204ENST00000542032 HERC5Q9UII4 1024 aaKnown RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 MAGED2Q9UNF1 606 aaPredicted RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 LRRFIP2Q9Y608 721 aaKnown RBP3.91□□□□□ -1.78
LEMD3-204ENST00000542032 A6NCN8 305 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 AGAP5A6NIR3 686 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 LACTBL1A8MY62 500 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PRR23D1E9PI22 279 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 NCAM2O15394 837 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 SKAP2O75563 359 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 LCATP04180 440 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PTMAP06454 111 aaKnown RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 ITGA2BP08514 1039 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 CYP21A2P08686 494 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PRR23D2P0DMB1 279 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 HSD3B1P14060 373 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 VEGFAP15692 232 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 ARSBP15848 533 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 HOXB9P17482 250 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PRPH2P23942 346 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 CDC25AP30304 524 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 CHRNA5P30532 468 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 DDIT3P35638 169 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 RXRGP48443 463 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 POLE2P56282 527 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 ROR2Q01974 943 aaKnown RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PPFIA1Q13136 1202 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 TBX2Q13207 712 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 G3BP1Q13283 466 aaKnown RBP eCLIP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 DCTN1Q14203 1278 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 DUSP6Q16828 381 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 ALG10Q5BKT4 473 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 ALG10BQ5I7T1 473 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 ATPAF1Q5TC12 328 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 TANGO2Q6ICL3 276 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 FAM180BQ6P0A1 224 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PGBD2Q6P3X8 592 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 AAGABQ6PD74 315 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 CYP26C1Q6V0L0 522 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 TBC1D1Q86TI0 1168 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 TMEM200AQ86VY9 491 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 CREBRFQ8IUR6 639 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 IQCF1Q8N6M8 205 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 RBMXL3Q8N7X1 1067 aaKnown RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 SCAMP5Q8TAC9 235 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 GABPB2Q8TAK5 448 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 BICD2Q8TD16 824 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 OIT3Q8WWZ8 545 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PPM1MQ96MI6 270 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 Q9N2J8 555 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 GGA3Q9NZ52 723 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 WWOXQ9NZC7 414 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 GRHPRQ9UBQ7 328 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 POLG2Q9UHN1 485 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 NOL7Q9UMY1 257 aaKnown RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 C19orf53Q9UNZ5 99 aaPredicted RBP3.9□□□□□ -1.79
LEMD3-204ENST00000542032 SLC45A1Q9Y2W3 748 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 PCDHA10Q9Y5I2 948 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 RPGRIP1LQ68CZ1 1315 aa3.9□□□□□ -1.79
LEMD3-204ENST00000542032 EME2A4GXA9 379 aaPredicted RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 B9A039 149 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 ACTL6BO94805 426 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 CD4P01730 458 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TNFRSF8P28908 595 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 HOXA11P31270 313 aaPredicted RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TNFSF8P32971 234 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TERF1P54274 439 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 EIF5P55010 431 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 SELENOVP59797 346 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 RNASELQ05823 741 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 Q0VFX4 171 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TRAF1Q13077 416 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 GALNTL6Q49A17 601 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 ARL13AQ5H913 290 aaPredicted RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 MTFR2Q6P444 385 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 SLC30A9Q6PML9 568 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 SLC16A12Q6ZSM3 486 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TRILQ7L0X0 811 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 RAB11FIP2Q7L804 512 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 ANKS1BQ7Z6G8 1248 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 CTU1Q7Z7A3 348 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 RBM23Q86U06 439 aaKnown RBP3.89□□□□□ -1.79
LEMD3-204ENST00000542032 FBXL14Q8N1E6 418 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 TMEM217Q8N7C4 229 aa3.89□□□□□ -1.79
LEMD3-204ENST00000542032 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms