RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ATXN2Q99700 1313 aaKnown RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 A0A1W2PP55 124 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 MYO1FO00160 1098 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 MCF2LO15068 1137 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 KDELR3O43731 214 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 BNIP3LO60238 219 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 PRPSAP2O60256 369 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 RAMP2O60895 175 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 LRP3O75074 770 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 IL1BP01584 269 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 DNTTP04053 509 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 CD48P09326 243 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 TPM1P09493 284 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 H2AFZP0C0S5 128 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 TMEM253P0C7T8 217 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ERCC2P18074 760 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 OXTRP30559 389 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 DRD3P35462 400 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 NNMTP40261 264 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 PSMD8P48556 350 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ARSEP51690 589 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 TAS2R40P59535 323 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 IRX4P78413 519 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ZBTB16Q05516 673 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 DPYSQ14117 519 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ELAVL3Q14576 367 aaKnown RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 ACAP1Q15027 740 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 POM121L1PQ3SYA9 428 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 BOLA3Q53S33 107 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 PPP6R3Q5H9R7 873 aaPredicted RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 PEAR1Q5VY43 1037 aaPredicted RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 AFMIDQ63HM1 303 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 IL31Q6EBC2 164 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 DPY19L3Q6ZPD9 716 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 PRR23CQ6ZRP0 262 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 RFX8Q6ZV50 586 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 H2AFVQ71UI9 128 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 POLNQ7Z5Q5 900 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 PSTKQ8IV42 348 aaKnown RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 ARHGAP12Q8IWW6 846 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 UMODL1-AS1Q8N2C9 162 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 NPWQ8N729 165 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ZNF564Q8TBZ8 553 aaPredicted RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 HSPH1Q92598 858 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 CELF6Q96J87 481 aaKnown RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 HSPA12BQ96MM6 686 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 EPAS1Q99814 870 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ORAI3Q9BRQ5 295 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 SLC39A8Q9C0K1 460 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 MAGEH1Q9H213 219 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 DEF6Q9H4E7 631 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 LRRC19Q9H756 370 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 FBRSQ9HAH7 460 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 EBF2Q9HAK2 575 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 ETNK2Q9NVF9 386 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 FBXL12Q9NXK8 326 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 CTTNBP2NLQ9P2B4 639 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 IP6K2Q9UHH9 426 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 SLC25A13Q9UJS0 675 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 FCF1Q9Y324 198 aaKnown RBP9.94□□□□□ -0.82
YBX3-212ENST00000542002 SDK1Q7Z5N4 2213 aa9.94□□□□□ -0.82
YBX3-212ENST00000542002 PTPRZ1P23471 2315 aaPredicted RBP9.93□□□□□ -0.82
YBX3-212ENST00000542002 RASA4BC9J798 803 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 J3KR12 359 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 EEF2KO00418 725 aaKnown RBP9.93□□□□□ -0.82
YBX3-212ENST00000542002 RASA4O43374 803 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 NDUFS2O75306 463 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 PROSCO94903 275 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 AMPD1P23109 780 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 GKP32189 559 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 HCAR3P49019 387 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
YBX3-212ENST00000542002 TPI1P60174 286 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 SLC20A2Q08357 652 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 MMRN1Q13201 1228 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 SERINC3Q13530 473 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 CYTH1Q15438 398 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 DPYSL2Q16555 572 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 ARSIQ5FYB1 569 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 DCAF12L1Q5VU92 463 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 LYSMD4Q5XG99 296 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.93□□□□□ -0.82
YBX3-212ENST00000542002 ARHGAP36Q6ZRI8 547 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 USP30Q70CQ3 517 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 CYP2U1Q7Z449 544 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 SYT12Q8IV01 421 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 HDDC3Q8N4P3 179 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 CADM4Q8NFZ8 388 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 FAM71BQ8TC56 605 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 CTNNBL1Q8WYA6 563 aaPredicted RBP9.93□□□□□ -0.82
YBX3-212ENST00000542002 DNASE2BQ8WZ79 361 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 TSC1Q92574 1164 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 FAM131CQ96AQ9 280 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 RMDN1Q96DB5 314 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 VPS45Q9NRW7 570 aa9.93□□□□□ -0.82
YBX3-212ENST00000542002 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.93□□□□□ -0.82
YBX3-212ENST00000542002 UVRAGQ9P2Y5 699 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms