RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ABCG1P45844 678 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 GABRB2P47870 512 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 GATMP50440 423 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 SERPINB8P50452 374 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 CDH15P55291 814 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 HDAC4P56524 1084 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 MRPS6P82932 125 aaKnown RBP9.32□□□□□ -0.92
THBS3-211ENST00000541990 CDK18Q07002 472 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 MBTPS1Q14703 1052 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 SLC27A1Q6PCB7 646 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 CMC1Q7Z7K0 106 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 SIGLEC10Q96LC7 697 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 LRGUKQ96M69 825 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 SEMA6AQ9H2E6 1030 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 WDR55Q9H6Y2 383 aaPredicted RBP9.32□□□□□ -0.92
THBS3-211ENST00000541990 COG4Q9H9E3 785 aa9.32□□□□□ -0.92
THBS3-211ENST00000541990 HMX1Q9NP08 348 aaPredicted RBP9.32□□□□□ -0.92
THBS3-211ENST00000541990 SCN1AP35498 2009 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 TET1Q8NFU7 2136 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SMIM28A0A1B0GU29 152 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 PLOD2O00469 737 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SPAG6O75602 509 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 RGS7P49802 495 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SCNN1GP51170 649 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 CTBSQ01459 385 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 CEACAM7Q14002 265 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 FLOT2Q14254 428 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 PPP2R5DQ14738 602 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 CA9Q16790 459 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 HADHQ16836 314 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 FAM219BQ5XKK7 198 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 NOTUMQ6P988 496 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 CES3Q6UWW8 571 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ZBTB46Q86UZ6 589 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SNX32Q86XE0 403 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 XYLT1Q86Y38 959 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 AHI1Q8N157 1196 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 KLHDC9Q8NEP7 349 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 BHLHE22Q8NFJ8 381 aaPredicted RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 CMASQ8NFW8 434 aaPredicted RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 CXorf38Q8TB03 319 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ZSCAN18Q8TBC5 510 aaPredicted RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 FNDC8Q8TC99 324 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 MIPOL1Q8TD10 442 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 KBTBD7Q8WVZ9 684 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 NDRG1Q92597 394 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 CDRT15Q96T59 188 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 STARD7Q9NQZ5 370 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ARHGAP26Q9UNA1 814 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SORCS3Q9UPU3 1222 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SSX2IPQ9Y2D8 614 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 EFR3BQ9Y2G0 817 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 MRPL42Q9Y6G3 142 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 A0A1W2PQ45 241 aaPredicted RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 A0A1W2PQY0 241 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 WDR27A2RRH5 827 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 RNASEH2AO75792 299 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 LSM8O95777 96 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 SERPINE1P05121 402 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 FAM58BPP0C7Q3 252 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 THRAP10827 490 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 MCF2P10911 925 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 SH3BGRP55822 239 aaPredicted RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 BCAR1P56945 870 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 TMEM198Q66K66 360 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ACOT1Q86TX2 421 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 PLD6Q8N2A8 252 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 PLD5Q8N7P1 536 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 GSDMBQ8TAX9 411 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 PPP4R1Q8TF05 950 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 CMTM5Q96DZ9 223 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ZFRQ96KR1 1074 aaKnown RBP9.31□□□□□ -0.92
THBS3-211ENST00000541990 GLT1D1Q96MS3 346 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ADAM2Q99965 735 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 ELOVL4Q9GZR5 314 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 DNAJC28Q9NX36 388 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 DOLKQ9UPQ8 538 aa9.31□□□□□ -0.92
THBS3-211ENST00000541990 B4GALT3O60512 393 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 COL6A2P12110 1019 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 P4HA1P13674 534 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 ARSAP15289 507 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 IL4RP24394 825 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 NDST2P52849 883 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 MTA1Q13330 715 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 ZNF667Q5HYK9 610 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 LGSNQ5TDP6 509 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 ELMSAN1Q6PJG2 1045 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 DEFB128Q7Z7B8 93 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 RNF180Q86T96 592 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 SERINC5Q86VE9 423 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 RAB3IL1Q8TBN0 382 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 HEXIM2Q96MH2 286 aaKnown RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 SIKE1Q9BRV8 207 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 BEGAINQ9BUH8 593 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 KATNAL1Q9BW62 490 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 SLC2A11Q9BYW1 496 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
THBS3-211ENST00000541990 C6orf203Q9P0P8 240 aaPredicted RBP9.3□□□□□ -0.92
THBS3-211ENST00000541990 RAB26Q9ULW5 256 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms