RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 C22orf31O95567 290 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 SERPINE1P05121 402 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 HSPA14Q0VDF9 509 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 IRF2BP2Q7Z5L9 587 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 CPA6Q8N4T0 437 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 SCLYQ96I15 445 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 APOPT1Q96IL0 206 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 BTN2A3PQ96KV6 586 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 C11orf49Q9H6J7 331 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 TRPC4Q9UBN4 977 aa14.32□□□□□ -0.12
USP3-204ENST00000540797 A0A087X1B8 175 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 TARSP26639 723 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 PRKAA2P54646 552 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 MAD2L1Q13257 205 aaPredicted RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 BBS12Q6ZW61 710 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 SLC51AQ86UW1 340 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CREG2Q8IUH2 290 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CFAP52Q8N1V2 620 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 GALNT4Q8N4A0 578 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 EVA1BQ9NVM1 165 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 GNPTGQ9UJJ9 305 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 C16orf96A6NNT2 1141 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 SLC1A6P48664 564 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 PIK3CGP48736 1102 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 SLC5A3P53794 718 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CRADDP78560 199 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 JOSD2Q8TAC2 188 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 LGMNQ99538 433 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 TMEM120AQ9BXJ8 343 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 OPTCQ9UBM4 332 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 ZMYM5Q9UJ78 669 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.31□□□□□ -0.12
USP3-204ENST00000540797 GPSM3Q9Y4H4 160 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 hCG_1818297A0A087WSY0 165 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 KRT87PA6NCN2 255 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 BTNL10A8MVZ5 291 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 BAIAP3O94812 1187 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 SULT2A1Q06520 285 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 DAB2IPQ5VWQ8 1189 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 AFTPHQ6ULP2 937 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 TCP10LQ8TDR4 215 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 HDAC7Q8WUI4 952 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 ANKZF1Q9H8Y5 726 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 TMPRSS4Q9NRS4 437 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 PLK2Q9NYY3 685 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 RPS6KB2Q9UBS0 482 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 AFDNP55196 1824 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 PSMA4P25789 261 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 RPL22P35268 128 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 PTPN20Q4JDL3 420 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 STRADAQ7RTN6 431 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 SH3GL1Q99961 368 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 TCF25Q9BQ70 676 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 ZNHIT2Q9UHR6 403 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 SNX8Q9Y5X2 465 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 FAM47E-STBD1D6RA91 191 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 PHGDHO43175 533 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 TPST1O60507 370 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CLDN11O75508 207 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 AMD1P17707 334 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CES1P23141 567 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 HTR1BP28222 390 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 ALDH6A1Q02252 535 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 TCEA2Q15560 299 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 MPPE1Q53F39 396 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 ALLCQ8N6M5 410 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
USP3-204ENST00000540797 ARNTL2Q8WYA1 636 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 ACBD6Q9BR61 282 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 OSBPL1AQ9BXW6 950 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 CCDC134Q9H6E4 229 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 DEC1Q9P2X7 70 aa14.31□□□□□ -0.12
USP3-204ENST00000540797 AKAP12Q02952 1782 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 SEC22BO75396 215 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 BMP10O95393 424 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 DNTTP04053 509 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 CORO1AP31146 461 aaKnown RBP14.3□□□□□ -0.12
USP3-204ENST00000540797 TLE2Q04725 743 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 AGKQ53H12 422 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 MDM4O15151 490 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 IFNA14P01570 189 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 APODP05090 189 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 CTPS1P17812 591 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 KRT78Q8N1N4 520 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 BLOC1S6Q9UL45 172 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 GRM6O15303 877 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 TAS2R40P59535 323 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 SKP1P63208 163 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
USP3-204ENST00000540797 PPP1R15BQ5SWA1 713 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 CXorf40BQ96DE9 158 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 ZFYVE19Q96K21 471 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 XRN1Q8IZH2 1706 aaKnown RBP14.3□□□□□ -0.12
USP3-204ENST00000540797 ARVCFO00192 962 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 ABCG1P45844 678 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 MARCKSL1P49006 195 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 TTPAP49638 278 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 PLK1P53350 603 aa14.3□□□□□ -0.12
USP3-204ENST00000540797 STXBP5Q5T5C0 1151 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms