RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 DXOO77932 396 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 LCA5LO95447 670 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 NTRK1P04629 796 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 CKMT2P17540 419 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 VAV2P52735 878 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 GALCP54803 685 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 C21orf59P57076 290 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 C1QBPQ07021 282 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 ADIGQ0VDE8 80 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 KIF5AQ12840 1032 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 PTPN20Q4JDL3 420 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 BROXQ5VW32 411 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 OR6B2Q6IFH4 312 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 PMF1Q6P1K2 205 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 ADAT2Q7Z6V5 191 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 STK32AQ8WU08 396 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 SLC35F5Q8WV83 523 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 HSFY1Q96LI6 401 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 TSGA10Q9BZW7 698 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 SGK2Q9HBY8 427 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 CNOT8Q9UFF9 292 aaKnown RBP12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 NUDT5Q9UKK9 219 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 ADGRG1Q9Y653 693 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 CENPEQ02224 2701 aa12.88□□□□□ -0.35
CLSTN3-208ENST00000538933 E5RJQ4 531 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 GOLGA8SH3BPF8 625 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 TULP2O00295 520 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 KRT86O43790 486 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 MT-CO3P00414 261 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 ACP1P24666 158 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 RXRGP48443 463 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 TKTL1P51854 596 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 ZBTB16Q05516 673 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 E2F5Q15329 346 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 PROX2Q3B8N5 592 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 KIAA0895LQ68EN5 471 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 DNAJC24Q6P3W2 148 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 GPRIN1Q7Z2K8 1008 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 PHLDB2Q86SQ0 1253 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 DNAAF5Q86Y56 855 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 MCOLN2Q8IZK6 566 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 WDTC1Q8N5D0 677 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 KCTD13Q8WZ19 329 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 CPXM1Q96SM3 734 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 SELENOOQ9BVL4 669 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 DPH1Q9BZG8 443 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 UBXN6Q9BZV1 441 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 FBXO44Q9H4M3 255 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 MRPL47Q9HD33 250 aaKnown RBP12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 PNPLA8Q9NP80 782 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 PRSS16Q9NQE7 514 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 INTUQ9ULD6 942 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 PYCARDQ9ULZ3 195 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 SCML2Q9UQR0 700 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 PPP2R2CQ9Y2T4 447 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 SCINQ9Y6U3 715 aa12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 COL27A1Q8IZC6 1860 aaPredicted RBP12.87□□□□□ -0.35
CLSTN3-208ENST00000538933 GOLGA6L9A6NEM1 432 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 HHLA1C9JL84 531 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 KLK10O43240 276 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 SART1O43290 800 aaKnown RBP12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 FBXO21O94952 628 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ERBB2P04626 1255 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 MPOP05164 745 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 TMEM253P0C7T8 217 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 DESP17661 470 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 MMP8P22894 467 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 NOP2P46087 812 aaKnown RBP12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ERVPABLB-1P60509 514 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 C2CD6Q53TS8 623 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 CDCP2Q5VXM1 449 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 KIAA1614Q5VZ46 1190 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 DCUN1D2Q6PH85 259 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 KDM7AQ6ZMT4 941 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 PRICKLE2Q7Z3G6 844 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ZDHHC17Q8IUH5 632 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ZNF276Q8N554 614 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ZNF366Q8N895 744 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 EXD3Q8N9H8 876 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 FAM149B1Q96BN6 582 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 SLC4A5Q9BY07 1137 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 SLC2A11Q9BYW1 496 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 TRIM4Q9C037 500 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 CIPCQ9C0C6 399 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 THAP2Q9H0W7 228 aa12.86□□□□□ -0.35
CLSTN3-208ENST00000538933 ASCL3Q9NQ33 180 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms