RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 FAM186AA6NE01 2351 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 CBX4O00257 560 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 ECI2O75521 394 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 PENKP01210 267 aaPredicted RBP14.44□□□□□ -0.1
CD4-208ENST00000538827 MZF1P28698 734 aaPredicted RBP14.44□□□□□ -0.1
CD4-208ENST00000538827 ADCY8P40145 1251 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 GAD2Q05329 585 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 GPS1Q13098 491 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 SERINC3Q13530 473 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 MPP7Q5T2T1 576 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 ARHGEF18Q6ZSZ5 1173 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 MFSD6LQ8IWD5 586 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 KIAA1958Q8N8K9 716 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 NAT16Q8N8M0 369 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 TTC8Q8TAM2 541 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 CCHCR1Q8TD31 782 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 CASKIN2Q8WXE0 1202 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
CD4-208ENST00000538827 PNKPQ96T60 521 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 ERP44Q9BS26 406 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 ABCB8Q9NUT2 735 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 MARK1Q9P0L2 795 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 CLEC4EQ9ULY5 219 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 HPCAL4Q9UM19 191 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 TBC1D30Q9Y2I9 924 aa14.44□□□□□ -0.1
CD4-208ENST00000538827 A0A0A0MRY4 1105 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 TARSL2A2RTX5 802 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 J3KR12 359 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 CTIFO43310 598 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 MTSS1O43312 755 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 MAFKO60675 156 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 PSMC3P17980 439 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 GLDCP23378 1020 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 CCNCP24863 283 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 PTPN3P26045 913 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 STIP1P31948 543 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 CD70P32970 193 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 RPL22P35268 128 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 BASP1P80723 227 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 KDSRQ06136 332 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 TNK2Q07912 1038 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 ZBTB17Q13105 803 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 HTR4Q13639 388 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 HLTFQ14527 1009 aaKnown RBP eCLIP14.43□□□□□ -0.1
CD4-208ENST00000538827 P3H1Q32P28 736 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 FAXCQ5TGI0 409 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 IZUMO3Q5VZ72 239 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 RHBDF2Q6PJF5 856 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 ZNF783Q6ZMS7 281 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 LRRC49Q8IUZ0 686 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 IFT20Q8IY31 132 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 GSPT2Q8IYD1 628 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 GPR161Q8N6U8 529 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 IFT81Q8WYA0 676 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 SNF8Q96H20 258 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 SPATA13Q96N96 652 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 TSGA13Q96PP4 275 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 USP29Q9HBJ7 922 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 HPS4Q9NQG7 708 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 FAM86C1Q9NVL1 165 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 DNAJC17Q9NVM6 304 aaKnown RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 KIAA1522Q9P206 1035 aaPredicted RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 PAK5Q9P286 719 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 UBA2Q9UBT2 640 aaPredicted RBP14.43□□□□□ -0.1
CD4-208ENST00000538827 RSPH14Q9UHP6 348 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 CACNA1BQ00975 2339 aa14.43□□□□□ -0.1
CD4-208ENST00000538827 MYO18AQ92614 2054 aaKnown RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 MATN3O15232 486 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 HOXC11O43248 304 aaPredicted RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 SNAP91O60641 907 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 PRAMEF11O60813 436 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 JCHAINP01591 159 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 PABPC1P11940 636 aaKnown RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 RPL21P46778 160 aaKnown RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 ID4P47928 161 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ZNF33AQ06730 810 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 IL10RBQ08334 325 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 FCHO2Q0JRZ9 810 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 WASHC5Q12768 1159 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 CALCOCO2Q13137 446 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ZNF235Q14590 738 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 PITRM1Q5JRX3 1037 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ANKRD20A2Q5SQ80 823 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 TMCO4Q5TGY1 634 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ANKRD20A1Q5TYW2 823 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ANKRD20A3Q5VUR7 823 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 DUPD1Q68J44 220 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 PID1Q7Z2X4 250 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 C12orf40Q86WS4 652 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ADGRG2Q8IZP9 1017 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 APCDD1Q8J025 514 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ZNF567Q8N184 647 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.42□□□□□ -0.1
CD4-208ENST00000538827 ZNF557Q8N988 423 aaPredicted RBP14.42□□□□□ -0.1
CD4-208ENST00000538827 DCAF4L2Q8NA75 395 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 FIBINQ8TAL6 211 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 LRRC45Q96CN5 670 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 RTP4Q96DX8 246 aa14.42□□□□□ -0.1
CD4-208ENST00000538827 AGAP3Q96P47 875 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms