RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 APOL5Q9BWW9 433 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PARD6BQ9BYG5 372 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MAGEB5Q9BZ81 275 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TRIM4Q9C037 500 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TKTL2Q9H0I9 626 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DHX35Q9H5Z1 703 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PIF1Q9H611 641 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM248Q9NWD8 314 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SPATA6Q9NWH7 488 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ZSCAN32Q9NX65 697 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SMPD4Q9NXE4 827 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 GGA2Q9UJY4 613 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM59LQ9UK28 342 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 USP18Q9UMW8 372 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TIMM22Q9Y584 194 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 FAM170BA6NMN3 283 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 YJEFN3A6XGL0 299 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 E7ENQ6 273 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MAP3K13O43283 966 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 AP5Z1O43299 807 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 GALR2O43603 387 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KDM1AO60341 852 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ANXA9O76027 345 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 POP4O95707 220 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KRT1P04264 644 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CYP17A1P05093 508 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TYRP14679 529 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 BTF3P20290 206 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MCM3P25205 808 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 EPHB2P29323 1055 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 GJA4P35212 333 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 VCPP55072 806 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IL10RBQ08334 325 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MAMLD1Q13495 774 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 TANGO2Q6ICL3 276 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 WDR59Q6PJI9 974 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 VITQ6UXI7 678 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SERPINA13PQ6UXR4 307 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MICALCLQ6ZW33 695 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SYT13Q7L8C5 426 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ZNF571Q7Z3V5 609 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SCD5Q86SK9 330 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 WDR5BQ86VZ2 330 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SCUBE3Q8IX30 993 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC105Q8IYK2 499 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KATNAL2Q8IYT4 538 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CARNMT1Q8N4J0 409 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SMYD1Q8NB12 490 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 DTWD2Q8NBA8 298 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 OR2T3Q8NH03 318 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SLC30A5Q8TAD4 765 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 FAM76AQ8TAV0 307 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 SUN5Q8TC36 379 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CPA5Q8WXQ8 436 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 KCNK16Q96T55 309 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 C19orf43Q9BQ61 176 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 CINPQ9BW66 212 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 IKZF4Q9H2S9 585 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 VPS45Q9NRW7 570 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 ELOVL2Q9NXB9 296 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 PSD3Q9NYI0 1048 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NCKIPSDQ9NZQ3 722 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 UBA2Q9UBT2 640 aaPredicted RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 XPO7Q9UIA9 1087 aaKnown RBP3.66□□□□□ -1.82
PTPN22-211ENST00000538253 MMP17Q9ULZ9 603 aa3.66□□□□□ -1.82
PTPN22-211ENST00000538253 NLRC5Q86WI3 1866 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 RGSL1A5PLK6 1076 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 DDX3XO00571 662 aaKnown RBP eCLIP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 PAGE1O75459 146 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 HEXIM1O94992 359 aaKnown RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 MOCS2O96007 188 aaPredicted RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 IGLV3-25P01717 112 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 SYPP08247 313 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 ALOX15P16050 662 aaPredicted RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 C5AR1P21730 350 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 SERPINA4P29622 427 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 OR1E1P30953 314 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 HSD17B7P56937 341 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 CORO7P57737 925 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGAP8P85298 464 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 SUZ12Q15022 739 aaKnown RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 DPYSL2Q16555 572 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 TMEM196Q5HYL7 178 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 LY6G5CQ5SRR4 150 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 TEX35Q5T0J7 233 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 PIK3R6Q5UE93 754 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 FYB2Q5VWT5 728 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 IL31Q6EBC2 164 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 LPCAT2Q7L5N7 544 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 ARHGAP22Q7Z5H3 698 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 LINC00523Q86TU6 105 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 PRPF39Q86UA1 669 aaKnown RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 SPATS2Q86XZ4 545 aaKnown RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 CCDC50Q8IVM0 306 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 WDR75Q8IWA0 830 aaKnown RBP3.65□□□□□ -1.82
PTPN22-211ENST00000538253 SIX5Q8N196 739 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 UMODL1-AS1Q8N2C9 162 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 PGBD3Q8N328 593 aa3.65□□□□□ -1.82
PTPN22-211ENST00000538253 MIPOL1Q8TD10 442 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms