RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 OR51B4Q9Y5P0 310 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 ALG6Q9Y672 507 aa13.85□□□□□ -0.19
RPAIN-205ENST00000536255 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 A0A0D9SEW6 157 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 CXorf51AA0A1B0GTR3 108 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 PSTPIP1O43586 416 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 ERCC2P18074 760 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 MPLP40238 635 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
RPAIN-205ENST00000536255 NDST2P52849 883 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 GEMIN4P57678 1058 aaKnown RBP13.84□□□□□ -0.19
RPAIN-205ENST00000536255 TAS2R40P59535 323 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 SLC20A2Q08357 652 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 DPYSQ14117 519 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 HNRNPA1L2Q32P51 320 aaKnown RBP13.84□□□□□ -0.19
RPAIN-205ENST00000536255 PARP15Q460N3 678 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 SPDYCQ5MJ68 293 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 IL31Q6EBC2 164 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 TXNRD3NBQ6F5E7 133 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 RETSATQ6NUM9 610 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF354CQ86Y25 554 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 CACUL1Q86Y37 369 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 TMEFF1Q8IYR6 380 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 UMODL1-AS1Q8N2C9 162 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 RNF10Q8N5U6 811 aaKnown RBP13.84□□□□□ -0.19
RPAIN-205ENST00000536255 FAM71BQ8TC56 605 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 CSPG4P5Q96PW8 444 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 ZNF670Q9BS34 389 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 SPON2Q9BUD6 331 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 CALN1Q9BXU9 219 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 PCDH18Q9HCL0 1135 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 CD93Q9NPY3 652 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 USP36Q9P275 1121 aaKnown RBP13.84□□□□□ -0.19
RPAIN-205ENST00000536255 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 CKAP5Q14008 2032 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 PLXND1Q9Y4D7 1925 aa13.84□□□□□ -0.19
RPAIN-205ENST00000536255 DOCK4Q8N1I0 1966 aa13.83□□□□□ -0.19
RPAIN-205ENST00000536255 SPAG17Q6Q759 2223 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 MACROD2A1Z1Q3 448 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 BCLAF3A2AJT9 711 aaKnown RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 ZSCAN5CA6NGD5 496 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 TTC34A8MYJ7 566 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 CBX4O00257 560 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 FOXD2O60548 495 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 C7P10643 843 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 ACADMP11310 421 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 SERPINB6P35237 376 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 DHPSP49366 369 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 NUMBP49757 651 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 STK19P49842 368 aaPredicted RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 RPL6Q02878 288 aaKnown RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 CREB5Q02930 508 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 LMNB2Q03252 620 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 CCDC6Q16204 474 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 PLA2G2CQ5R387 149 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 TMCO3Q6UWJ1 677 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 CYP2U1Q7Z449 544 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 VSIG1Q86XK7 387 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 CPNE8Q86YQ8 564 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 OR7D4Q8NG98 312 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 KIAA1524Q8TCG1 905 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 TSC1Q92574 1164 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 ARHGEF2Q92974 986 aaKnown RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 RPL10LQ96L21 214 aaKnown RBP13.83□□□□□ -0.2
RPAIN-205ENST00000536255 PSMB7Q99436 277 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 MTG2Q9H4K7 406 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 ITM2CQ9NQX7 267 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 VPS45Q9NRW7 570 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 NDFIP2Q9NV92 336 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 VPS51Q9UID3 782 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 SLCO3A1Q9UIG8 710 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 SALL4Q9UJQ4 1053 aa13.83□□□□□ -0.2
RPAIN-205ENST00000536255 EDDM13A0A1B0GTR0 161 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 LRRD1A4D1F6 860 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ZNF487B1APH4 448 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 RASA4BC9J798 803 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 RASA4O43374 803 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 SIN3BO75182 1162 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 IGLV3-19P01714 112 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ZNF806P0C7X5 589 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 TNNT1P13805 278 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 KDELR1P24390 212 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 CD6P30203 668 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 PTGER3P43115 390 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 TPMTP51580 245 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ARSEP51690 589 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 CLCN6P51797 869 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ZBTB16Q05516 673 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 CCDC173Q0VFZ6 552 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 DPYSL3Q14195 570 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ATP13A4Q4VNC1 1196 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 LYSMD4Q5XG99 296 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ZNF776Q68DI1 518 aaPredicted RBP13.82□□□□□ -0.2
RPAIN-205ENST00000536255 PRR23CQ6ZRP0 262 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ZNF662Q6ZS27 426 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ARMCX6Q7L4S7 300 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 ATP11CQ8NB49 1132 aa13.82□□□□□ -0.2
RPAIN-205ENST00000536255 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms