RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 ZNF534Q76KX8 674 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 CTU1Q7Z7A3 348 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 KBTBD6Q86V97 674 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 DNAI2Q9GZS0 605 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 SMARCAD1Q9H4L7 1026 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ZNF408Q9H9D4 720 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 GOLGA2P5Q9HBQ8 144 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 MOCS1Q9NZB8 636 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 HUS1O60921 280 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ATP5BP06576 529 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 SETSIPP0DME0 302 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 NCBP2-AS2Q69YL0 99 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 BEST2Q8NFU1 509 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 RP9Q8TA86 221 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 GRIN3AQ8TCU5 1115 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 LPGAT1Q92604 370 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 PBXIP1Q96AQ6 731 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 QKIQ96PU8 341 aaKnown RBP eCLIP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 STN1Q9H668 368 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 RSL24D1Q9UHA3 163 aaKnown RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 DMTF1Q9Y222 760 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 RAP2CQ9Y3L5 183 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 NR5A2O00482 541 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ZBTB24O43167 697 aaPredicted RBP16.16■□□□□ 0.18
MCF2L-232ENST00000535094 CLIC3O95833 236 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 LMO2P25791 158 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 PCSK6P29122 969 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 PSMD7P51665 324 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 SEMA5AQ13591 1074 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ZNF280DQ6N043 979 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 ZFP1Q6P2D0 407 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 OLFML1Q6UWY5 402 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 NXNL1Q96CM4 212 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 POMKQ9H5K3 350 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 PLAC1Q9HBJ0 212 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 TUBGCP4Q9UGJ1 667 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 CROCCQ5TZA2 2017 aa16.16■□□□□ 0.18
MCF2L-232ENST00000535094 RNASEH2AO75792 299 aaKnown RBP16.15■□□□□ 0.18
MCF2L-232ENST00000535094 JUNP05412 331 aaKnown RBP16.15■□□□□ 0.18
MCF2L-232ENST00000535094 ERCC2P18074 760 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 RXRBP28702 533 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 NDUFV1P49821 464 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 GRAMD4Q6IC98 578 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 EPGNQ6UW88 154 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 DENND6AQ8IWF6 608 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 RBBP8Q99708 897 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 CCDC28BQ9BUN5 200 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 TNFSF13BQ9Y275 285 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 BTAF1O14981 1849 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 HEATR9A2RTY3 570 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 ZBBXA8MT70 800 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 UBDO15205 165 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 HBP1O60381 514 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 IQCF3P0C7M6 154 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 STMN1P16949 149 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 NMBRP28336 390 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 MAP3K7CLP57077 242 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 HPCAP84074 193 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 XIAPP98170 497 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 SPANXN3Q5MJ09 141 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 FKBP1CQ5VVH2 108 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 HERC6Q8IVU3 1022 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 MRPL46Q9H2W6 279 aaKnown RBP16.15■□□□□ 0.18
MCF2L-232ENST00000535094 ANKRD33BA6NCL7 494 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 PDLIM1O00151 329 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 MRASO14807 208 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 STT3AP46977 705 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 MPP1Q00013 466 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 ILDR2Q71H61 639 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 SETD3Q86TU7 594 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-232ENST00000535094 PIGZQ86VD9 579 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 ZNF512Q96ME7 567 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-232ENST00000535094 PLEKHA5Q9HAU0 1116 aa16.15■□□□□ 0.18
MCF2L-232ENST00000535094 ATICP31939 592 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 LPIN1Q14693 890 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 MYBPC3Q14896 1274 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 OTUD3Q5T2D3 398 aaPredicted RBP16.14■□□□□ 0.18
MCF2L-232ENST00000535094 OTOP3Q7RTS5 596 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 FSTL5Q8N475 847 aaPredicted RBP16.14■□□□□ 0.18
MCF2L-232ENST00000535094 REPS2Q8NFH8 660 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 OR9I1Q8NGQ6 314 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 SPATA22Q8NHS9 363 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 BCO2Q9BYV7 579 aa16.14■□□□□ 0.18
MCF2L-232ENST00000535094 SRP72O76094 671 aaKnown RBP16.14■□□□□ 0.17
MCF2L-232ENST00000535094 UGT1A6P19224 532 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 SLC7A2P52569 658 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 CDH13P55290 713 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 MYBPC1Q00872 1141 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 CACNB2Q08289 660 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-232ENST00000535094 FBXO48Q5FWF7 155 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 TBCELQ5QJ74 424 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 ZNF470Q6ECI4 717 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 CATSPERGQ6ZRH7 1159 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 METTL25Q8N6Q8 603 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 PRICKLE1Q96MT3 831 aaPredicted RBP16.14■□□□□ 0.17
MCF2L-232ENST00000535094 TRIM8Q9BZR9 551 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 NCKIPSDQ9NZQ3 722 aa16.14■□□□□ 0.17
MCF2L-232ENST00000535094 PRPF19Q9UMS4 504 aaKnown RBP16.14■□□□□ 0.17
MCF2L-232ENST00000535094 XPOTO43592 962 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms