RNA–Protein interactions for RNA: ENST00000533898.5

RCN1-211, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-211ENST00000533898 FAM234BA2RU67 622 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 OTOL1A6NHN0 477 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 OR6C75A6NL08 312 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 TACC1O75410 805 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 WISP1O95388 367 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 TNFRSF6BO95407 300 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 COL6A2P12110 1019 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 MYL4P12829 197 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 MTNR1BP49286 362 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ZNF132P52740 706 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ITGA8P53708 1063 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 PITX1P78337 314 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 IFI16Q16666 785 aaKnown RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 MAN2A1Q16706 1144 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 TPD52L1Q16890 204 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 PABPC1LQ4VXU2 614 aaKnown RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 RAB6CQ53S08 254 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 RETSATQ6NUM9 610 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 DENND1BQ6P3S1 775 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 UNQ6494/PRO21346Q6UXR6 183 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 CLEC20AQ6ZU45 233 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ARMCX6Q7L4S7 300 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 DNAJB7Q7Z6W7 309 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 PHLDB2Q86SQ0 1253 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SFTPA1Q8IWL2 248 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 DNAJB8Q8NHS0 232 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 MYCBPAPQ8TBZ2 947 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 UHRF1Q96T88 793 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 RAB6CQ9H0N0 254 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SNX25Q9H3E2 840 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 NMUR1Q9HB89 426 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.3□□□□□ -1.72
RCN1-211ENST00000533898 NPFFR2Q9Y5X5 522 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ANAPC1Q9H1A4 1944 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 MYO16Q9Y6X6 1858 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SHISA7A6NL88 538 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SLC38A8A6NNN8 435 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 LGALS16A8MUM7 142 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 O00370 1275 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SLITRK5O94991 958 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 CCDC192P0DO97 292 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 CD19P15391 556 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 CD72P21854 359 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 GABRR2P28476 465 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 GTF2H1P32780 548 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 KRT20P35900 424 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 USP8P40818 1118 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 NUMBP49757 651 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SLC5A3P53794 718 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 TNK2Q07912 1038 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 IL10RAQ13651 578 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 EXOC3L4Q17RC7 722 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 GOLGA7BQ2TAP0 167 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ANKRD39Q53RE8 183 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 PITRM1Q5JRX3 1037 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 FAM78AQ5JUQ0 283 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ZNF468Q5VIY5 522 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 TANGO2Q6ICL3 276 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 DARS2Q6PI48 645 aaKnown RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 METTL23Q86XA0 190 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 SNX32Q86XE0 403 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 CPNE8Q86YQ8 564 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ZNF527Q8NB42 609 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 CHFRQ96EP1 664 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 PPM1MQ96MI6 270 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 FCRL3Q96P31 734 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 CDCA3Q99618 268 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 AP1M1Q9BXS5 423 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 ZDHHC5Q9C0B5 715 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 EPHX3Q9H6B9 360 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 WDR6Q9NNW5 1121 aaKnown RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 POLR3BQ9NW08 1133 aaPredicted RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 LRFN1Q9P244 771 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 LIMA1Q9UHB6 759 aaKnown RBP4.3□□□□□ -1.72
RCN1-211ENST00000533898 CDH9Q9ULB4 789 aa4.3□□□□□ -1.72
RCN1-211ENST00000533898 PATJQ8NI35 1801 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 ATG2BQ96BY7 2078 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 MYOFQ9NZM1 2061 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 SDK1Q7Z5N4 2213 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 ZNF318Q5VUA4 2279 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 EP300Q09472 2414 aaPredicted RBP4.29□□□□□ -1.72
RCN1-211ENST00000533898 LOC730098B7Z3J9 87 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 H3BML4 177 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 H7C4K7 107 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 KRT5P13647 590 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 UCHL3P15374 230 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 ATICP31939 592 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 LHX1P48742 406 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 GPR85P60893 370 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 POLR2FP61218 127 aaKnown RBP4.29□□□□□ -1.72
RCN1-211ENST00000533898 CDK17Q00537 523 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 CLEC16AQ2KHT3 1053 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 AAK1Q2M2I8 961 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 CFAP221Q4G0U5 840 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 PKDCCQ504Y2 493 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 RIF1Q5UIP0 2472 aaKnown RBP4.29□□□□□ -1.72
RCN1-211ENST00000533898 TRIM68Q6AZZ1 485 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 PMF1Q6P1K2 205 aa4.29□□□□□ -1.72
RCN1-211ENST00000533898 FOXR2Q6PJQ5 311 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms