RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 PTPRN2Q92932 1015 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 ERLEC1Q96DZ1 483 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 SIPA1Q96FS4 1042 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 CELF6Q96J87 481 aaKnown RBP20.24■□□□□ 0.83
CHEK1-215ENST00000533778 SPACA7Q96KW9 195 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 MAK16Q9BXY0 300 aaKnown RBP20.24■□□□□ 0.83
CHEK1-215ENST00000533778 TPSD1Q9BZJ3 242 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 SLC39A8Q9C0K1 460 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 KLHL11Q9NVR0 708 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 HYOU1Q9Y4L1 999 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 R4GN57 208 aa20.24■□□□□ 0.83
CHEK1-215ENST00000533778 MACROD2A1Z1Q3 448 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 KRT1P04264 644 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 ACADMP11310 421 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 RECQLP46063 649 aaPredicted RBP20.23■□□□□ 0.83
CHEK1-215ENST00000533778 PAPOLAP51003 745 aaKnown RBP20.23■□□□□ 0.83
CHEK1-215ENST00000533778 COPAP53621 1224 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 NHLH1Q02575 133 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 MMRN1Q13201 1228 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 INO80DQ53TQ3 878 aaPredicted RBP20.23■□□□□ 0.83
CHEK1-215ENST00000533778 ZNF776Q68DI1 518 aaPredicted RBP20.23■□□□□ 0.83
CHEK1-215ENST00000533778 RAPGEF5Q92565 580 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 FAF2Q96CS3 445 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 MKRN2Q9H000 416 aaKnown RBP20.23■□□□□ 0.83
CHEK1-215ENST00000533778 KLC2Q9H0B6 622 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 RSPH9Q9H1X1 276 aaPredicted RBP20.23■□□□□ 0.83
CHEK1-215ENST00000533778 SCML1Q9UN30 329 aa20.23■□□□□ 0.83
CHEK1-215ENST00000533778 DFFAO00273 331 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 ALOX15BO15296 676 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 HRO43593 1189 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 DNTTP04053 509 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 C7P10643 843 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 ZNF662Q6ZS27 426 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 CEP68Q76N32 757 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 LRRC49Q8IUZ0 686 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 PCDH20Q8N6Y1 951 aaKnown RBP20.22■□□□□ 0.83
CHEK1-215ENST00000533778 NPWQ8N729 165 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 PCDH19Q8TAB3 1148 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.22■□□□□ 0.83
CHEK1-215ENST00000533778 UBE2Q2Q8WVN8 375 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 OR8D1Q8WZ84 308 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 ISG20Q96AZ6 181 aaKnown RBP20.22■□□□□ 0.83
CHEK1-215ENST00000533778 PDLIM2Q96JY6 352 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 GOLPH3Q9H4A6 298 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 MTG2Q9H4K7 406 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 CACNA1IQ9P0X4 2223 aa20.22■□□□□ 0.83
CHEK1-215ENST00000533778 K7ERQ8 282 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 MCF2LO15068 1137 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 ZRANB2O95218 330 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHEK1-215ENST00000533778 ZFXP17010 805 aaPredicted RBP20.21■□□□□ 0.83
CHEK1-215ENST00000533778 SIM2Q14190 667 aaPredicted RBP20.21■□□□□ 0.83
CHEK1-215ENST00000533778 C22orf39Q6P5X5 142 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 Q6ZVU0 165 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 ARHGAP12Q8IWW6 846 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 PLPP6Q8IY26 295 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 KATNAL2Q8IYT4 538 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 RCOR2Q8IZ40 523 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 RNF157Q96PX1 679 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 EPC1Q9H2F5 836 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 SP110Q9HB58 689 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 ITM2CQ9NQX7 267 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 FAM86C1Q9NVL1 165 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 UBA2Q9UBT2 640 aaPredicted RBP20.21■□□□□ 0.83
CHEK1-215ENST00000533778 TRIM10Q9UDY6 481 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 RAB23Q9ULC3 237 aa20.21■□□□□ 0.83
CHEK1-215ENST00000533778 CCDC66A2RUB6 948 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 GRID2IPA4D2P6 1211 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 PROB1E7EW31 1015 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 SMAD6O43541 496 aaKnown RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 PRAMEF11O60813 436 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 OXTRP30559 389 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 P2RY2P41231 377 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 RPS14P62263 151 aaKnown RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 IL10RBQ08334 325 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 PAFAH1B3Q15102 231 aaKnown RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 TTC31Q49AM3 519 aaPredicted RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 FAM46CQ5VWP2 391 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 SLC36A4Q6YBV0 504 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 STK40Q8N2I9 435 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 LRRC57Q8N9N7 239 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 RNF25Q96BH1 459 aaPredicted RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 RBM41Q96IZ5 413 aaKnown RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 SLC6A17Q9H1V8 727 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 ETNK2Q9NVF9 386 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 IPO11Q9UI26 975 aaKnown RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 AMFRQ9UKV5 643 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 FCF1Q9Y324 198 aaKnown RBP20.2■□□□□ 0.82
CHEK1-215ENST00000533778 PCDHA3Q9Y5H8 950 aa20.2■□□□□ 0.82
CHEK1-215ENST00000533778 ATG2BQ96BY7 2078 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 C3orf70A6NLC5 250 aaPredicted RBP20.19■□□□□ 0.82
CHEK1-215ENST00000533778 C1QTNF3-AMACRE9PGA6 284 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 MAP3K13O43283 966 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 BNIP3LO60238 219 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 PALMO75781 387 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 CD160O95971 181 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 ADH1BP00325 375 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 VAV1P15498 845 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 MX2P20592 715 aa20.19■□□□□ 0.82
CHEK1-215ENST00000533778 CTNNA1P35221 906 aaKnown RBP20.19■□□□□ 0.82
CHEK1-215ENST00000533778 DNA2P51530 1060 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms