RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CCDC185Q8N715 623 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 DCAF4L2Q8NA75 395 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 GRIN3AQ8TCU5 1115 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ACE2Q9BYF1 805 aaPredicted RBP10.69□□□□□ -0.7
CAPN1-225ENST00000533704 TNKS2Q9H2K2 1166 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 OR12D3Q9UGF7 316 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 ADAMTS1Q9UHI8 967 aa10.69□□□□□ -0.7
CAPN1-225ENST00000533704 IGF2RP11717 2491 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 PTPRBP23467 1997 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 ILVBLA1L0T0 632 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 GOLGA8CPA6NN73 597 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 MCF2LO15068 1137 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 HYAL3O43820 417 aaPredicted RBP10.68□□□□□ -0.7
CAPN1-225ENST00000533704 TNFAIP3P21580 790 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 CHRNA3P32297 505 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 DRD3P35462 400 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 PTPN9P43378 593 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 CCR5P51681 352 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 HDAC4P56524 1084 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 RACK1P63244 317 aaKnown RBP10.68□□□□□ -0.7
CAPN1-225ENST00000533704 SHC2P98077 582 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 GNA12Q03113 381 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
CAPN1-225ENST00000533704 ASIC2Q16515 512 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 KCNT1Q5JUK3 1230 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 PRAMEF14Q5SWL7 426 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 C22orf39Q6P5X5 142 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 DCUN1D2Q6PH85 259 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 MON1BQ7L1V2 547 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 STRADAQ7RTN6 431 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 BNIPLQ7Z465 357 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF354CQ86Y25 554 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 CHST14Q8NCH0 376 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 C3orf20Q8ND61 904 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 SERAC1Q96JX3 654 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 MCEEQ96PE7 176 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 BPIFA3Q9BQP9 254 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 ORAI3Q9BRQ5 295 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 SCNM1Q9BWG6 230 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 MAGEB5Q9BZ81 275 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 EBF2Q9HAK2 575 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 OSGEPQ9NPF4 335 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 RTN4Q9NQC3 1192 aaKnown RBP10.68□□□□□ -0.7
CAPN1-225ENST00000533704 DYRK4Q9NR20 520 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 DNAI1Q9UI46 699 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 HS3ST2Q9Y278 367 aa10.68□□□□□ -0.7
CAPN1-225ENST00000533704 ANKRD36A6QL64 1941 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 SYCE3A1L190 88 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 LRRC53A6NM62 1247 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 SIGLEC16A6NMB1 481 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 FAM72CH0Y354 149 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 H0Y8X5 98 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 WNT9AO14904 365 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ALOX15BO15296 676 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 CCP110O43303 1012 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 LRIG2O94898 1065 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 SERPINC1P01008 464 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 CTSLP07711 333 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 PLEKP08567 350 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 CD38P28907 300 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ACVRL1P37023 503 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 VASPP50552 380 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 CCT8P50990 548 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ST3GAL2Q16842 350 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 CCDC157Q569K6 752 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 EFHC2Q5JST6 749 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 FAM72AQ5TYM5 149 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 AGBL4Q5VU57 503 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ACAD10Q6JQN1 1059 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 FAM72DQ6L9T8 149 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 RETSATQ6NUM9 610 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ZNF783Q6ZMS7 281 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 LEKR1Q6ZMV7 388 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 PRPF39Q86UA1 669 aaKnown RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 FAM72BQ86X60 149 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 RYBPQ8N488 228 aaPredicted RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 PNPLA1Q8N8W4 532 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 OR2A12Q8NGT7 310 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 RHBDD1Q8TEB9 315 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 KLK6Q92876 244 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ARRDC3Q96B67 414 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 SKA1Q96BD8 255 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 TBC1D31Q96DN5 1066 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 MYOCQ99972 504 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 TAS2R14Q9NYV8 317 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 PPARGC1AQ9UBK2 798 aaKnown RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 PPM1HQ9ULR3 514 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 FCF1Q9Y324 198 aaKnown RBP10.67□□□□□ -0.7
CAPN1-225ENST00000533704 ACTL7AQ9Y615 435 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 USP24Q9UPU5 2620 aa10.67□□□□□ -0.7
CAPN1-225ENST00000533704 VILLO15195 856 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 FLRT2O43155 660 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 SLC7A4O43246 635 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 ATMINO43313 823 aaPredicted RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 PLRG1O43660 514 aaKnown RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 CREB3O43889 395 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 RNGTTO60942 597 aaKnown RBP10.66□□□□□ -0.7
CAPN1-225ENST00000533704 PRNPP04156 253 aa10.66□□□□□ -0.7
CAPN1-225ENST00000533704 WNT1P04628 370 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms