RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 H0Y858 1186 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ELL2O00472 640 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 TRAFD1O14545 582 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 KCNQ3O43525 872 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PI15O43692 258 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 BRINP1O60477 761 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PLOD3O60568 738 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 TLR2O60603 784 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PSIP1O75475 530 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 ALDH1A2O94788 518 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 SUN1O94901 812 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 TRIM16O95361 564 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 LYPLA2O95372 231 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PLEKHA8P1O95397 391 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 GAS8O95995 478 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 KNG1P01042 644 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 TFRCP02786 760 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 NR1D1P20393 614 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CDH3P22223 829 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CYP3A7P24462 503 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 SHMT1P34896 483 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ATP6V1E1P36543 226 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CD86P42081 329 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 STAT1P42224 750 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 MTIF2P46199 727 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 PIP4K2AP48426 406 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 STARP49675 285 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 RASSF2P50749 326 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 RAP1GDS1P52306 607 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 HADHBP55084 474 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 RAB4BP61018 213 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 STX1BP61266 288 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 HAND2P61296 217 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 GNG11P61952 73 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PHC1P78364 1004 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 GSTO1P78417 241 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 COG7P83436 770 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PRKG2Q13237 762 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 STX3Q13277 289 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PKP1Q13835 747 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 HNRNPDQ14103 355 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 TGFBIQ15582 683 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ZNF829Q3KNS6 432 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 LSM12Q3MHD2 195 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 TTMPQ5BVD1 217 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 TMEM63BQ5T3F8 832 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 C6orf183Q5T699 404 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CIAPIN1Q6FI81 312 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 FAM180BQ6P0A1 224 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PGM2L1Q6PCE3 622 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 C1orf228Q6PIY5 440 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 UNQ6494/PRO21346Q6UXR6 183 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 NIPA1Q7RTP0 329 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 GSTA5Q7RTV2 222 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CCDC25Q86WR0 208 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ERI1Q8IV48 349 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 SYTL1Q8IYJ3 562 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ADGRF2Q8IZF7 708 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 LINC00518Q8N0U6 118 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 IQCKQ8N0W5 287 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 UBE2J2Q8N2K1 259 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 FAM133AQ8N9E0 248 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CDC26Q8NHZ8 85 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ZNF641Q96N77 438 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 TSNARE1Q96NA8 513 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 FOXB1Q99853 325 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 TCF25Q9BQ70 676 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 PI4K2AQ9BTU6 479 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 MYL10Q9BUA6 226 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CALN1Q9BXU9 219 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 SLC13A1Q9BZW2 595 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 TTYH3Q9C0H2 523 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 NLRC4Q9NPP4 1024 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ETNK2Q9NVF9 386 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 LUZP4Q9P127 313 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ZNF624Q9P2J8 865 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 SLC12A6Q9UHW9 1150 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 MSRAQ9UJ68 235 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 SLC8A2Q9UPR5 921 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 DTX4Q9Y2E6 619 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 WBP11Q9Y2W2 641 aaKnown RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 DTNAQ9Y4J8 743 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 ZNF532Q9HCE3 1301 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 SALL1Q9NSC2 1324 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 DAPK1P53355 1430 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 C9orf84Q5VXU9 1444 aa5.64□□□□□ -1.51
CD44-236ENST00000533222 CDK12Q9NYV4 1490 aaPredicted RBP5.64□□□□□ -1.51
CD44-236ENST00000533222 LAMC3Q9Y6N6 1575 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 TARBP1Q13395 1621 aaKnown RBP5.63□□□□□ -1.51
CD44-236ENST00000533222 CHD2O14647 1828 aaKnown RBP5.63□□□□□ -1.51
CD44-236ENST00000533222 EVPLLA8MZ36 301 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 UBXN8O00124 270 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 SGK1O00141 431 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 LAD1O00515 517 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 RAD51BO15315 384 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 KATNA1O75449 491 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 KLHL18O94889 574 aa5.63□□□□□ -1.51
CD44-236ENST00000533222 APOL3O95236 402 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms