RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 ARHGAP20Q9P2F6 1191 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 HS3ST2Q9Y278 367 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 ITPR1Q14643 2758 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 A0A0D9SEW6 157 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 DRGXA6NNA5 263 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 E9PAM4 449 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 F8VZ95 297 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 I6L893 689 aaPredicted RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 ENC1O14682 589 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 RNGTTO60942 597 aaKnown RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 DKK1O94907 266 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 CAPNS1P04632 268 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 TPM2P07951 284 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 EEF1GP26641 437 aaKnown RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 CHRNA3P32297 505 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 NUDT1P36639 197 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 SCNN1AP37088 669 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 RECQLP46063 649 aaPredicted RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 CCDC15Q0P6D6 951 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 BNIP3Q12983 259 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 SHBQ15464 509 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 SETMARQ53H47 684 aaPredicted RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 ACBD5Q5T8D3 534 aaPredicted RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 TRIM69Q86WT6 500 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 FAM131BQ86XD5 332 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 OXR1Q8N573 874 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 KLK6Q92876 244 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 PSMB7Q99436 277 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 MYOCQ99972 504 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 NAA15Q9BXJ9 866 aaKnown RBP18.24■□□□□ 0.51
PCF11-206ENST00000533018 VPS16Q9H269 839 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 TNKS2Q9H2K2 1166 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 PREBQ9HCU5 417 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 TMEM51Q9NW97 253 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 DMTF1Q9Y222 760 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 APC2O95996 2303 aa18.24■□□□□ 0.51
PCF11-206ENST00000533018 TDRD6O60522 2096 aaKnown RBP18.23■□□□□ 0.51
PCF11-206ENST00000533018 TRABD2BA6NFA1 517 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 C10orf142B7Z368 130 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 PRAMEF26H0Y7S4 382 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 SLC31A1O15431 190 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 SMAD6O43541 496 aaKnown RBP18.23■□□□□ 0.51
PCF11-206ENST00000533018 MAGEC1O60732 1142 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 GFPT2O94808 682 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 CTSLP07711 333 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 GLDCP23378 1020 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 EPHA8P29322 1005 aaPredicted RBP18.23■□□□□ 0.51
PCF11-206ENST00000533018 ATP11AP98196 1134 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 DNAJC3Q13217 504 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 SMAD1Q15797 465 aaKnown RBP18.23■□□□□ 0.51
PCF11-206ENST00000533018 C19orf48Q6RUI8 117 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 PHLDB2Q86SQ0 1253 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 ZNF683Q8IZ20 524 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 DCAF4L2Q8NA75 395 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 OR7D4Q8NG98 312 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 OR2A12Q8NGT7 310 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 GRIN3AQ8TCU5 1115 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 FAM131CQ96AQ9 280 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 METTL5Q9NRN9 209 aaKnown RBP18.23■□□□□ 0.51
PCF11-206ENST00000533018 CA5BQ9Y2D0 317 aa18.23■□□□□ 0.51
PCF11-206ENST00000533018 COL5A1P20908 1838 aaPredicted RBP18.22■□□□□ 0.51
PCF11-206ENST00000533018 PRNPP04156 253 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 DNA2P51530 1060 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 CLCN6P51797 869 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 NOMO3P69849 1222 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 CYP4F3Q08477 520 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 CDO1Q16878 200 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 CT47A1Q5JQC4 288 aaPredicted RBP18.22■□□□□ 0.51
PCF11-206ENST00000533018 RETSATQ6NUM9 610 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 IQCHQ86VS3 1027 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 SPATS2Q86XZ4 545 aaKnown RBP18.22■□□□□ 0.51
PCF11-206ENST00000533018 EMC1Q8N766 993 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 CHST14Q8NCH0 376 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 TMIEQ8NEW7 156 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 EPS8L1Q8TE68 723 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 KLHDC7BQ96G42 594 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 HAPLN3Q96S86 360 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 ZYG11BQ9C0D3 744 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 ERVMER34-1Q9H9K5 563 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 ATP13A1Q9HD20 1204 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 IL36AQ9UHA7 158 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 TMEM59LQ9UK28 342 aa18.22■□□□□ 0.51
PCF11-206ENST00000533018 URB1O60287 2271 aaKnown RBP18.21■□□□□ 0.51
PCF11-206ENST00000533018 ADAMTS20P59510 1910 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 A0A1W2PQU0 124 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 RFPL3O75679 317 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 PCDH8O95206 1070 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 JUPP14923 745 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 PRLRP16471 622 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 KLK7P49862 253 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 TAS2R38P59533 333 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 POLR2FP61218 127 aaKnown RBP18.21■□□□□ 0.51
PCF11-206ENST00000533018 OVGP1Q12889 678 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 ARSIQ5FYB1 569 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 FKBP15Q5T1M5 1219 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 PIP5KL1Q5T9C9 394 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 TRNP1Q6NT89 227 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 C22orf39Q6P5X5 142 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 DRC7Q8IY82 874 aa18.21■□□□□ 0.51
PCF11-206ENST00000533018 SLC20A1Q8WUM9 679 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms