RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FBXO4Q9UKT5 387 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 DTX4Q9Y2E6 619 aa3.21□□□□□ -1.9
CD44-234ENST00000531873 REXO2Q9Y3B8 237 aaKnown RBP3.21□□□□□ -1.9
CD44-234ENST00000531873 C17orf113A0A1B0GUU1 675 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 A0A1W2PQF6 199 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 TCRBV7S3A2A0A539 114 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 CEP104O60308 925 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 PLOD3O60568 738 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 SEC14L2O76054 403 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 CCNDBP1O95273 360 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 ACSL1P33121 698 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 GARSP41250 739 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 CLK3P49761 638 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 OAZ1P54368 228 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 EIF3BP55884 814 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 RPL7AP62424 266 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 MC1RQ01726 317 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 TMEM115Q12893 351 aaPredicted RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 BECN1Q14457 450 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 ZNF169Q14929 603 aaPredicted RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 WTAPQ15007 396 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 LSM12Q3MHD2 195 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 DUSP28Q4G0W2 176 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 GLE1Q53GS7 698 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 TTLL5Q6EMB2 1281 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 TMEM65Q6PI78 240 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 CYP20A1Q6UW02 462 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 DHRS13Q6UX07 377 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 RANBP10Q6VN20 620 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 TRIM72Q6ZMU5 477 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 IKBIPQ70UQ0 350 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 SLC29A4Q7RTT9 530 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 WDTC1Q8N5D0 677 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 ZFPM2Q8WW38 1151 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 FAM120BQ96EK7 910 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 DAZAP1Q96EP5 407 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 SAAL1Q96ER3 474 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 ADAD1Q96M93 576 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 NUAK2Q9H093 628 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 SYNCQ9H7C4 482 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 MMRN2Q9H8L6 949 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 C20orf141Q9NUB4 165 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 HCFC1R1Q9NWW0 138 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 C11orf21Q9P2W6 132 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 SERGEFQ9UGK8 458 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 LIMA1Q9UHB6 759 aaKnown RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 MKLN1Q9UL63 735 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 CORO1CQ9ULV4 474 aaPredicted RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 PCDHGB4Q9UN71 923 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 ADAM18Q9Y3Q7 739 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 HEMK1Q9Y5R4 338 aaPredicted RBP3.2□□□□□ -1.9
CD44-234ENST00000531873 KCNE2Q9Y6J6 123 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 CAPN7Q9Y6W3 813 aa3.2□□□□□ -1.9
CD44-234ENST00000531873 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CBY3A6NI87 242 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 LIPT2A6NK58 231 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 KCNJ18B7U540 433 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 BTBD19C9JJ37 291 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 VILLO15195 856 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 NARSO43776 548 aaKnown RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 PAGE4O60829 102 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 ENO1P06733 434 aaKnown RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 ADRB2P07550 413 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 SPARCP09486 303 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 NHLRC4P0CG21 123 aaPredicted RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 FCGR2AP12318 317 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 EDN2P20800 178 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 KRT20P35900 424 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CPOXP36551 454 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 PLA2G5P39877 138 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 AVPR1BP47901 424 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 RARSP54136 660 aaKnown RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 OLR1P78380 273 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CEBPZQ03701 1054 aaKnown RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 NEXNQ0ZGT2 675 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 MED22Q15528 200 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 SMN1Q16637 294 aaKnown RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 ANXA2RQ3ZCQ2 193 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 KIAA1755Q5JYT7 1200 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 TMEM63BQ5T3F8 832 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 TBC1D9BQ66K14 1250 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 AADACL2Q6P093 401 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CDC73Q6P1J9 531 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CEP85Q6P2H3 762 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 NCEH1Q6PIU2 408 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 KLHL24Q6TFL4 600 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 VSTM1Q6UX27 236 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 RPAP2Q8IXW5 612 aaPredicted RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 CPXM2Q8N436 756 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 TMEM217Q8N7C4 229 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 TMEM116Q8NCL8 245 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CADM4Q8NFZ8 388 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 NEU4Q8WWR8 484 aaPredicted RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 HSPH1Q92598 858 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CAVIN3Q969G5 261 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 INTS12Q96CB8 462 aaKnown RBP3.19□□□□□ -1.9
CD44-234ENST00000531873 RITA1Q96K30 269 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 WDFY2Q96P53 400 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 ASB2Q96Q27 587 aa3.19□□□□□ -1.9
CD44-234ENST00000531873 CADM1Q9BY67 442 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms